| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4769 |
|---|
| Symbol | |
|---|
| ID | 8007022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 140374 |
|---|
| End bp | 140946 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644821699 |
|---|
| Product | Tripartite ATP-independent periplasmic transporter DctQ component |
|---|
| Protein accession | YP_002972959 |
|---|
| Protein GI | 241113124 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.107599 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAG AAATTCATAC GCAAATCACG GCCGAAGAAA TCGGTCACGA GTTCGAAGGG
CACGCGCCGA CCGCAAACGT CTCGGACTAC GCCATTGAAG ACTGGATCAC GCTGAGCGTC
TTCTGGCTGA TGGCGGGTTG CGTCTTCCTG CAGTTCTTCA CGCGCTATGT GCTGAACGAC
AGCTACGCCT GGACCGAGGA GATTGCGATC AACTGCCTGA TCGGCGTCGT CTTTCTCGGT
TCCGTCATGT GCGTGCGCAC CTCGCGGCAT ATCCAGGTGG ATGTGTTCTA TCACTATATG
CCGGCAGGTC TGGCACGCGT GCTCGCCACT TTCGTCGATA TCGTTCGCAT TGGCTTCTTC
GCCTATGGCT GCCACCTGAT GTGGCGTTAC GTCGATATCG TCGCGGACGA GCAGATGGTC
ACCGTCGACC TGCCGCGCAA CATCGTCTTC TACAGCGTTC TCGTCGCCTT CGTGCTGATG
CTGATCCGCG CGGTCATCGT CTTCATCGCC AACATGCGCC GCGGCTACTC CGTTCTGGAG
CGCCCCGAAG AATTCCAGAC CGTCGAGGAT TGA
|
|---|
| Protein sequence | MSQEIHTQIT AEEIGHEFEG HAPTANVSDY AIEDWITLSV FWLMAGCVFL QFFTRYVLND
SYAWTEEIAI NCLIGVVFLG SVMCVRTSRH IQVDVFYHYM PAGLARVLAT FVDIVRIGFF
AYGCHLMWRY VDIVADEQMV TVDLPRNIVF YSVLVAFVLM LIRAVIVFIA NMRRGYSVLE
RPEEFQTVED
|
|---|
| |