| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4759 |
|---|
| Symbol | |
|---|
| ID | 8007012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 129000 |
|---|
| End bp | 129941 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644821689 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_002972949 |
|---|
| Protein GI | 241113114 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.125335 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.644601 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGA CGCGCAGACT GACACTTGCA GCTTTTGCCG GCGCACTGGC GCTTGGAACG
GCTCTTCCGG CCTTTTCGGC CGATCTCATC GCCATCATCA CGCCGGCGCA TGACAATCCC
TTCTTCAAGG CCGAAGCCGT CGGCGCCGAA GCCAAGGCGA AGGAGCTCGG CTACGAGACG
CTGCTCATGA CGCATGACGA CGACGCCAAC AAGCAGTCCG AAATGATCGA CACGGCGATC
GGCCGCGGCG CCAAGGCGAT CATCCTCGAC AATGCCGGAG CCGACGCCTC GGTCGCGGCC
GTCAAAAAGG CGAAGGATGC AGGCATCCCC TCCTTCCTGA TCGACCGTGA AATCAACGCG
ACCGGCGTTG CCGTCGCCCA GATCGTCTCG AACAACTATC AGGGCGCCCA GCTCGGGGCG
CAGGAATTCG TCAAGCTGAT GGGCGAGAAA GGCAATTACG TCGAGCTGGT GGGCAAGGAG
TCCGACACCA ATGCCGGCAT CCGCTCGCAA GGCTATCACG ACGTCATCGA CGACTATCCG
GACCTGAAGT CCGTCGCCAA GCAGTCGGCC AACTGGAGCC AGACGGAAGC CTATTCAAAG
ATGGAAACCA TCCTCCAGGC AAATCCCGAC ATCAAGGGCG TCATTTCAGG CAATGACACC
ATGGCCATGG GCGCCATCGC CGCGCTGCAG GCGGCCGGCC GCAAGGACGT GATCGTCGTC
GGCTTCGACG GTTCCAACGA CGTGCGCGAC TCCATCAAGT CGGGCGGCAT CAAGGCAACG
GTCCTGCAGC CCGCCTATGC GCAGGCTCAG CTGGCGGTGG AACAGGCAGA CGCATACATA
AAGAACAAGA CGACGCCAAA GGAAGAGAAG CAGTTGATGG ATTGCGTTCT CATCAACGCC
GACAATGCCG GCAAGCTCGA AACCTTCGCC CTGACGAACT GA
|
|---|
| Protein sequence | MKLTRRLTLA AFAGALALGT ALPAFSADLI AIITPAHDNP FFKAEAVGAE AKAKELGYET
LLMTHDDDAN KQSEMIDTAI GRGAKAIILD NAGADASVAA VKKAKDAGIP SFLIDREINA
TGVAVAQIVS NNYQGAQLGA QEFVKLMGEK GNYVELVGKE SDTNAGIRSQ GYHDVIDDYP
DLKSVAKQSA NWSQTEAYSK METILQANPD IKGVISGNDT MAMGAIAALQ AAGRKDVIVV
GFDGSNDVRD SIKSGGIKAT VLQPAYAQAQ LAVEQADAYI KNKTTPKEEK QLMDCVLINA
DNAGKLETFA LTN
|
|---|
| |