Gene Rleg_4687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_4687 
Symbol 
ID8007163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012848 
Strand
Start bp51492 
End bp52445 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content62% 
IMG OID644821621 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002972881 
Protein GI241113046 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC CGCTGCTTTC CGTCCGCGAC CTTTCGAAAC ATTATACCTC CCGCGGCACG 
CGGCTGAACA TTCTTCAGGG CATTTCCTTC GATATCGGCA AGGGTGAAGT CGTCGGGCTT
GTCGGCGAAT CCGGCAGCGG AAAGACCACG ATCGGGCGTT CCGTCCTTCG CCTCGTCGAA
CCGTCGTCCG GCAGCGTCCG TTTCGACGGG ACGGAACTCA CGGCACTTTC CGCCTCCGCG
CTAAGGCGGC AGCGGCCGCG CATGCAGTAT ATTTTCCAGG ATCCCTTCGC CAGCCTGTCG
CCGCGCATGA CGATCGGCGA GATCCTGACG GAAGGCCTGA AGATCCAGGG GATCGGCACC
GCCCGCGGCA GGCTCGAACG GGCGCAGTCG GCTTTGGTAA AGGTCGACCT GCCCGCCGAT
GCTATCAATC GATATGCCCA TGAATTTTCC GGTGGCCAGC GCCAGCGCGT CGGGATTGCC
CGTGCGTTGA CCTTGTCGCC GGAATTCATC GTCGCCGACG AGCCGGTTTC GGCGCTCGAC
GTGTCGATCC AGGCGCAAGT GATCAACCTG CTGCGCGACC TGCAGCAGCA GCTTGGCCTG
ACCATGCTGT TCATCTCGCA TGACCTTGCC GTCGTCGAAT ATATCTGCGA CCGGGTGATC
GTGCTCTATC TCGGCCGCAT CATGGAAATC GCGCCGAGTG CCGATCTCTA TGCGAGACCG
CAGCATCCCT ATACGCGTGC GCTTCTGTCG GCGATTCCGT CGCCCGATCC GGATGCCCGC
CGCAACAGGC AGATCCTGAA AGGCGATATT CCAAGTCCGG CCAATCCGCC GAGCGGATGT
GTTTTTCGCA CGCGCTGTCC GAGCGCGCTC GATGCCTGCG CCGGCGCCGT TCCGCAATTG
CGGGAAATCG CGCCCGGCCA CTTCAAGGCC TGCATCCGCG ACGACCTCAA TTGA
 
Protein sequence
MSEPLLSVRD LSKHYTSRGT RLNILQGISF DIGKGEVVGL VGESGSGKTT IGRSVLRLVE 
PSSGSVRFDG TELTALSASA LRRQRPRMQY IFQDPFASLS PRMTIGEILT EGLKIQGIGT
ARGRLERAQS ALVKVDLPAD AINRYAHEFS GGQRQRVGIA RALTLSPEFI VADEPVSALD
VSIQAQVINL LRDLQQQLGL TMLFISHDLA VVEYICDRVI VLYLGRIMEI APSADLYARP
QHPYTRALLS AIPSPDPDAR RNRQILKGDI PSPANPPSGC VFRTRCPSAL DACAGAVPQL
REIAPGHFKA CIRDDLN