| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4655 |
|---|
| Symbol | |
|---|
| ID | 8007133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 17868 |
|---|
| End bp | 19205 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644821591 |
|---|
| Product | Epoxide hydrolase domain protein |
|---|
| Protein accession | YP_002972851 |
|---|
| Protein GI | 241113016 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.246703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGT TTGACAATAT TCGCGCCTGG CGCCGGCTTG CCCGCGGAGC AATGGTGATG
GCGGTTGGAC CGATGTTGCT GTTCCCAGCC GGTTACCTTG TGCCGGCGAG TGCCGCCGAC
GTCACATCGG AAGGGCCGGC GACGCCGATC GAGGCCGACG AAACGATCCG CCCGTTCCAG
ATCCACGTTC CGCAGTCACA GCTTGACGAT CTGCGCAAGC GCATTGCCGA AACGCGTTGG
CCAGACAAGG AGACCGTGAG CGACACCTCG CAAGGCATCC AGCTTTCGCG CGTCCAGGAT
CTGGTCCGTT ACTGGGGCAC TGATTACGAT TGGCGCAAAG CCGAGGCTGA GCTCAATGCA
CTTCCGGAAT TCATCACGAC GATCGACGGG GTCGATATCC AGTTCATCCA TGTGCGATCG
CGTCATCCCA ACGCCCTTCC GGTCATTTTG ACCCATGGTT GGCCGGGTTC GACCTTCGAG
TTCATCAAGG CGATCGGCCC TCTTACCGAT CCGACTGCCT ATGGCGGTAA AGCGGAGGAC
GCATTTGATG TCGTCATCCC TTCCATCCCC GGCTACGGCT TTTCGGGTAA GCCGACGGAG
CTTGGCTGGG GCCCCGACCG CGTTGCGCGA GCATGGGACA TCCTGATGAA GCGGCTCGGC
TACGCGCACT ACGTTTCCCA GGGTGGCGAC CATGGTTCCG TTATCTCCGA CGCGCTGGCG
CGCCAGGCAC CGAAGGGTTT GCTTGGTATC CATCTCAACA TGCCGGCGAC CGTTCCGGGC
AATCTCACCA AGGCGGTCAA CAGTGGAGAC CCGGCTCCCG CAGGGCTGTC GGCGCCCGAG
CGGGATGCCT ATGAATCCCT GAGCACCTTT TTTGGCCGGA ATGCCGCCTA TGGGGCCGTG
ATGGTGACGC GTCCGCAGAC GATCGGCTAC TCGCTTTCCG ACTCGCCGTC GGGCCTAGCT
GCCTGGATCT ACGAAAAATT TGCGCAATGG AGCGATAGCG AGGGCATTCC CGAGCGTGTT
TTTTCCAAGG ACGAAATGCT GAATGACATC ACATTGTACT GGCTGACCAA CACTGGGGCA
TCCTCGTCGC GGTTCTATTG GGAAAACAAC AACAACAACT TCAGCTCAGA CGCCCAGAAG
ACCAAAGAGA TCAAGATCCC GGTGGCAATC AGCGTATTCC CAAAGGAGAT CTACCAGGCG
CCGGAGAGTT GGAGCAAGCA GGCCTATCCC ACGCTGCATT ACTACCACCG TGTCGATATG
GGCGGTCACT TCGCCGCCTG GGAACAGCCC CAACTTTTCG CTGAGGAACT GCGAGAGGCA
TTCAGATCGG TGCGTTGA
|
|---|
| Protein sequence | MKKFDNIRAW RRLARGAMVM AVGPMLLFPA GYLVPASAAD VTSEGPATPI EADETIRPFQ
IHVPQSQLDD LRKRIAETRW PDKETVSDTS QGIQLSRVQD LVRYWGTDYD WRKAEAELNA
LPEFITTIDG VDIQFIHVRS RHPNALPVIL THGWPGSTFE FIKAIGPLTD PTAYGGKAED
AFDVVIPSIP GYGFSGKPTE LGWGPDRVAR AWDILMKRLG YAHYVSQGGD HGSVISDALA
RQAPKGLLGI HLNMPATVPG NLTKAVNSGD PAPAGLSAPE RDAYESLSTF FGRNAAYGAV
MVTRPQTIGY SLSDSPSGLA AWIYEKFAQW SDSEGIPERV FSKDEMLNDI TLYWLTNTGA
SSSRFYWENN NNNFSSDAQK TKEIKIPVAI SVFPKEIYQA PESWSKQAYP TLHYYHRVDM
GGHFAAWEQP QLFAEELREA FRSVR
|
|---|
| |