| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4653 |
|---|
| Symbol | |
|---|
| ID | 8007131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | - |
|---|
| Start bp | 15736 |
|---|
| End bp | 16962 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644821589 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002972849 |
|---|
| Protein GI | 241113014 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.523264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAATC CGTATAAACA AATATTCGCG GCACCTGGGG CCAAGGGCTT CTCCGCAGCC
GGCTTTTTCG CACGCCTTCC TATCGCCATG GCGCCGATCG GCATCGTTGC CATGCTCTCC
CAGGCACATG GCGAATATTG GCTGGCGGGC GCCGTGTCGG CGACTTATGC GCTCACCAAT
GCGGTGATCT CGCCGCAGAT TTCGCGAGCG GTCGATCGGT TGGGCCAGAC GGCAGTCGTC
GTTCCCACAA CCATCGTATC CGTGCTGGCG TTCATCGCGC TGATCACCGC GACCAACCAG
AACTGGCCGG TGTGGACGCT GTTCGCCTCA GCCTTCCTCG CAGCGGCCAT GCCGAGCATT
CCGGCGCTGA TGCGGGCGCG CTGGACGGAA CTCTTTCGCA ACCGGCCCGA GCTCAACACC
GCCTTCGCGT TCGAAAGTGC CGCGGACGAA CTGGTCTATA TCGCCGGCGC CTCGCTGTCG
GTCGGGCTGG CCGTCGCCCT ATTCCCCGAA GCCGGCATGA TGGTGAGCAC AGCGTTTCTG
GCGCTCGGGA CGGCCGCCTT CATCGTGCAG CGCGGCACCG AGCCGAAGGT GCGTCATGTC
GCCGGCGCGG CTTCGGTTGG CTCCGCGATC CGCCAGCGTC CGGTGCAGGT CATCACGCTC
GCGCTGATCT TCGTCGGCGC GATCTTCGCA ACCGCTGAAG TGAGTGTTGT CGCCATCACC
AAGGAGCTTG GTCAGCCGAA TGCGGCAAGC CTGGTGATCG GTGTCTATGC CCTCGGTTCC
TTCCTGGTGG GTTTGACCCT CGGCGCGCTT AATCTGCGCA TCCCCTTGCA CCGTCAGCTG
CTGATCGCTG TTGCTATCCT CGCACTGACC TCGCTGCCGC TGCTCGTCGC CGGCAGCTCC
GTAACCCTGC TTGCTATCGC CGTCTTCGTC AGCGGCATCG CGATCTCGCC GACCTTTATA
ACGGCCTTCG GACTGATCGA GCGTCGCGTG CCGGAATCTG TGCTGACGGA AGGTGTCACC
TGGGTGATGA CCGGCATCGG CATCGGTATG GCACTCGGCG CCTTCGTCTC GGGCTGGGTC
GTCGACAGCT ATGGTCCCCA GAGCGGATTC TGGGTGTCTG CGGCCGCCGG GGCCGCGACC
GTCCTTACCA TTGCCCTTGG TCAGCGGACC CTCTCGGGCG AGTGCAGCGG CGGGGAGGAT
TGCGCGGTCC TGGAACCGGC GCAGTAG
|
|---|
| Protein sequence | MSNPYKQIFA APGAKGFSAA GFFARLPIAM APIGIVAMLS QAHGEYWLAG AVSATYALTN
AVISPQISRA VDRLGQTAVV VPTTIVSVLA FIALITATNQ NWPVWTLFAS AFLAAAMPSI
PALMRARWTE LFRNRPELNT AFAFESAADE LVYIAGASLS VGLAVALFPE AGMMVSTAFL
ALGTAAFIVQ RGTEPKVRHV AGAASVGSAI RQRPVQVITL ALIFVGAIFA TAEVSVVAIT
KELGQPNAAS LVIGVYALGS FLVGLTLGAL NLRIPLHRQL LIAVAILALT SLPLLVAGSS
VTLLAIAVFV SGIAISPTFI TAFGLIERRV PESVLTEGVT WVMTGIGIGM ALGAFVSGWV
VDSYGPQSGF WVSAAAGAAT VLTIALGQRT LSGECSGGED CAVLEPAQ
|
|---|
| |