| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3453 |
|---|
| Symbol | |
|---|
| ID | 7979524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012794 |
|---|
| Strand | - |
|---|
| Start bp | 21685 |
|---|
| End bp | 22254 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644800215 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_002951354 |
|---|
| Protein GI | 239828731 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.590005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.791222 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCATACGG TCCATCCGAT CAAAGATAGG GAAAAAATCG AAGCGATGAA AAAGATTTTG
CGTGCGTCGT CATTGCGGGA CGAGCTTCTT TTTACGATCG GGATCAATAC GGGTCTGCGG
ATCAGCGACA TCCTGTCTCT GAAAGTAGGA GATGTCCGGA ACAAAAAAGG CGTCGTCGAC
CGCCTGGAGA TTGTGGAGAA GAAAACGAAA AAGAGGCGCA TCGTTGCGCT AAATAAAAAG
ACGTGCCGCT TGATCGAACT CTATTTGGAA AAGGAGCGGC CGACCGCGCG AAACGACGAG
CCGTTGTTTC GCAGCCAAAA AGGAGACAGG GCGATCAGCC GCCAGCACGC CCACTACATT
TTAAACCGCG CCGCCAAAGC GGTGGGCATC ATGGAGCGCA TCGGAACGCA CTCTTTGCGC
AAAACATTTG GCTATTTCGC CTACAAGCAA GGAACGGACC TCGCAATGAT CCAAAAGCTG
CTCAATCATT CAAGCCAGGC AGAAACATTG CGTTACATCG GCATCACCCA AGAACAAATG
GACGAAGTCA TGCTGAAATT GGATTTATAG
|
|---|
| Protein sequence | MHTVHPIKDR EKIEAMKKIL RASSLRDELL FTIGINTGLR ISDILSLKVG DVRNKKGVVD
RLEIVEKKTK KRRIVALNKK TCRLIELYLE KERPTARNDE PLFRSQKGDR AISRQHAHYI
LNRAAKAVGI MERIGTHSLR KTFGYFAYKQ GTDLAMIQKL LNHSSQAETL RYIGITQEQM
DEVMLKLDL
|
|---|
| |