| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3452 |
|---|
| Symbol | |
|---|
| ID | 7979523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012794 |
|---|
| Strand | - |
|---|
| Start bp | 19401 |
|---|
| End bp | 20546 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644800214 |
|---|
| Product | initiator RepB protein |
|---|
| Protein accession | YP_002951353 |
|---|
| Protein GI | 239828730 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5527] Protein involved in initiation of plasmid replication |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.892853 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.996555 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTGC TGGACATCCA GCAATATAAT AAAGCGGTAA CAAAATCGAA CGCGCTGATT
GAGGCCAATT ATAAACTGTC TACCTTAGAA CAGAAGATTA TTTTGTATCT GATCAGCCAG
ATTCACAAGG ATGACGATGA TTTTAAGATG TATAGACTGC CGATACAGGA ATTTTCGGAG
ATGTTGGGAT ACCGTGGAAG CCCCAAATAT ACTGAGCTGA GAGAGATCAC CAAAAATTTG
ATGAGGAAAG TGCTCGAAAT TAGAGAAGGC CAGAAACTCA AACAGTTGAG CTGGGTTTCA
TACGTTGAAT ACGATGAGCG TTCCGGATTT GTTAGTCTAT CATTTGATCC TCGGCTGAAA
CCGTATCTTT TGCAACTTAA GAGGGAATTT ACGACTTACC GTTTGAAAAA TGTCATGGAG
TTAAAGAGTT CCTATTCGAT ACGCATGTAT GAGCTTTTAA AACGGTGGCA GTACATGAAG
GAAGTAGAGA TTTCACTTGA TGATCTGCGG ATGATGGTTG GGGCAGCAGA TAAATATCAT
CAGTATCACA ATTTCAAGAA AAGAGTGCTT ACACCGGCGC AACAGGAGAT TTTGGAGAAA
ACGGATATAT GGTTTAAGTA TCAGGAAGTG AGAAAAAAGC GGAAGGTCAT AGCTCTTCGG
TTTTATATAC AGGAAAAATC AACCATTGAT CAAGTGGTTG TTCCAATCGA GGAAAAAACC
GAAAACAATG CTACTGATCA GTATCTAAAG TTTTTAGCTG TTTTACAAGC ATATGATCGG
TACATAACAG AAAAACAGTT TATAAAAATC GCGCTTCTGG CGCAAAAGGT GTTCGGCGAA
AATTGGCTGG ATGAAGTGAT TAAGACAACC AGGGAAATCC TGCAGCGCGG AGACATTCGC
GAGCCAATCG CCTTCCTGAC TTACCTCTTG AATGAAAAAC TTGAGCGGGT CCGCATAGGT
TCGGATCATA ATGAGGTGGT TGTAAATAAA AAAGTCAGAG TCGTTCGAGG AGAGGCCGTA
CCGGATTGGC TCGAGGATTA TCAAAAGAAA CTGGCTGAAA GCAGCCAAAC TCGAGATACA
GACGAAGAGG ATATTGAACA GATACGCCGA GAGCTTGAAG AACGTTTGAA AAAGTATAAG
AATTAA
|
|---|
| Protein sequence | MQVLDIQQYN KAVTKSNALI EANYKLSTLE QKIILYLISQ IHKDDDDFKM YRLPIQEFSE
MLGYRGSPKY TELREITKNL MRKVLEIREG QKLKQLSWVS YVEYDERSGF VSLSFDPRLK
PYLLQLKREF TTYRLKNVME LKSSYSIRMY ELLKRWQYMK EVEISLDDLR MMVGAADKYH
QYHNFKKRVL TPAQQEILEK TDIWFKYQEV RKKRKVIALR FYIQEKSTID QVVVPIEEKT
ENNATDQYLK FLAVLQAYDR YITEKQFIKI ALLAQKVFGE NWLDEVIKTT REILQRGDIR
EPIAFLTYLL NEKLERVRIG SDHNEVVVNK KVRVVRGEAV PDWLEDYQKK LAESSQTRDT
DEEDIEQIRR ELEERLKKYK N
|
|---|
| |