Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_3439 |
Symbol | |
ID | 7979538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012794 |
Strand | + |
Start bp | 2232 |
End bp | 2642 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644800201 |
Product | hypothetical protein |
Protein accession | YP_002951340 |
Protein GI | 239828717 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000121933 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGCGT GTGAACGGTC CGACGCTGAC GATATAGAAA AAAGCACCAA TGAAGGGTGC CTTATTTTTG TAATGGATTT ACGCCAGTTC AACGATTTGC TAGGCGAGCG GTTCAATTTT GTCGTTTGGG CATTGGCTTG CCCGGAGCTG GCACTTGATT TTTTTGCGCA TTTCGCGTTT CACATCTTCC TTGTTGATCC AGTCAATGAC TACAAGGCTT TCAATGTGTT CGACGATGAT CTGAGTGATA TCTTTGAGCC GTTCTTTCTC GTCTTCTTGG TCCGGCCATT CGTTTTGGAG CAGCTGAAAG ATCGGATACG ATTGCGTCGT CAGTCCCTCT TCTTCAATAG CTTTGAACTG GTTGCACATT TTTTCGACAC AACGAAACAT AGGTATGTAT CAAGAATCTA G
|
Protein sequence | MAACERSDAD DIEKSTNEGC LIFVMDLRQF NDLLGERFNF VVWALACPEL ALDFFAHFAF HIFLVDPVND YKAFNVFDDD LSDIFEPFFL VFLVRPFVLE QLKDRIRLRR QSLFFNSFEL VAHFFDTTKH RYVSRI
|
| |