| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3402 |
|---|
| Symbol | |
|---|
| ID | 7976181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3433850 |
|---|
| End bp | 3434329 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644800166 |
|---|
| Product | protein of unknown function DUF163 |
|---|
| Protein accession | YP_002951305 |
|---|
| Protein GI | 239828681 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1576] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000153536 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCATATTC ACATTATTTC TGTTGGTAAG TTAAAAGAAA AATATTTGAT GCAAGGGATT
GACGAATATA AAAAACGATT ATCCAGTTAT GCGAAAGTTG ATATCATTGA AGTTCCTGAT
GAAAAAGCGC CAGAACATTT AAGTGAACAA GAAATGGAGC AAATTAAACA GCGGGAAGGG
GAACGCATTT TAGCGAAAAT TCCCAATGAC GCGTATGTGA TTGCCTTAGC GATCGAAGGA
AAGATGAAAT CGTCCGAGCA ATTTGCCGCC AGCCTAGACA AACTTGCCAC TTACGGAAAA
AGCAAAATCG CCTTTATCAT CGGCGGTTCG CTCGGCTTAA GCAAACAAGT GATGCAGCGC
GCCGATGAAG CGTTATCGTT TTCCAAAATG ACGTTCCCGC ACCAGCTGAT GCGTCTCATT
CTCCTTGAAC AAATTTACCG TGCGTTTCGG ATTAACCGGG GGGAGCCGTA TCATAAATAA
|
|---|
| Protein sequence | MHIHIISVGK LKEKYLMQGI DEYKKRLSSY AKVDIIEVPD EKAPEHLSEQ EMEQIKQREG
ERILAKIPND AYVIALAIEG KMKSSEQFAA SLDKLATYGK SKIAFIIGGS LGLSKQVMQR
ADEALSFSKM TFPHQLMRLI LLEQIYRAFR INRGEPYHK
|
|---|
| |