Gene GWCH70_3401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_3401 
Symbol 
ID7976180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp3432081 
End bp3433199 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content44% 
IMG OID644800165 
Productfatty acid desaturase 
Protein accessionYP_002951304 
Protein GI239828680 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000180374 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGT TTCATACGTT CGGTTGGTAT GCCGCCAGGA TTTCTCCACA TTTACCGAAA 
AAGGCGTTTC AACCTGTTCC GTCCCGCCTA TTTGGAGGTT TCGCTTATTT GTCGTTAACC
ATCGGCTGCA TCCTCGTTGT TTCTCTCTTG CATCTTCATC CGGTATGGAA TCTCCTCCTA
GCTGTTGTGT TAGGTTTCAG CTTTGCGGCA TTGGGGTTTT TAGGACATGA AATTTTGCAC
GGCACGGTCG TACGAAAGCC GTGGCTGCGT GATATTCTTG GCGCAATCGC ATTTTGGCCG
CTATGCACAG GTCCGAAGCT GTGGCGAAAA TGGCACAATG TGACTCATCA TGTACACACA
CAAGATGAAG AAATGGATCC GGATGCATGG CCTAGTTTAG AAAGGTTAGC CAAAAGCCGT
CTATTGCGCT GGGTATACAA AATTCCGTTT CCAATTCGTG CGTTTTTCGC TTTTAGTTCA
TTGTCTGTTA TGTTTACGCT TCATTCTATC AAGATGTTAA TCTATTTCTT CAAAGATTTT
CAGCCGAAAA ATCGCAGTGT GGTGCTGCTT CAGTTTTTCC TGCCATGGTC CACATGGATT
GGGCTGTTGT TTTTCATTGG ATTTGAGCGT TGGTTTTTTG CCTTTTTGTT GCCGCTATTG
ATTGCTAATT TTATTGTGAT GAGCTATATT TCCACGAACC ATCGTTTAAA TCCGTTAGTG
CCGGTAAATG ATCCGCTGGC AAACAGCCTT ACCGTAACGG TGCCAAAGTG GATAGATGTG
CTTCACTTTA ACTTCTCGTA TCATACCGAA CATCATCTGT TTCCAGCGAT GAGCTCGAAA
TATTACCCGT TAGTGAAGGA GCACATTAAA CGAATGTGGC CGGATCGGTA TCACGAATTG
CCAATGGGAA AAGCGTTAGC CGCGCTTTGG AAAACACCGA GAGTATATTA TCAGCAAAAC
GAGCTGATCG AGCCGCGGCA AGGACATGTT TACGGTTCGT TAGGCAACGG GTTGGATCCT
GAAAATATTA CTTATCGAAA CATGGAGGCA ATGCCGTTTT CCAGCTTGGA AGAGAAACCG
ATAATCATAA AAAAAGCAGT GGGAAAAGAG AAAAAGTAA
 
Protein sequence
MKEFHTFGWY AARISPHLPK KAFQPVPSRL FGGFAYLSLT IGCILVVSLL HLHPVWNLLL 
AVVLGFSFAA LGFLGHEILH GTVVRKPWLR DILGAIAFWP LCTGPKLWRK WHNVTHHVHT
QDEEMDPDAW PSLERLAKSR LLRWVYKIPF PIRAFFAFSS LSVMFTLHSI KMLIYFFKDF
QPKNRSVVLL QFFLPWSTWI GLLFFIGFER WFFAFLLPLL IANFIVMSYI STNHRLNPLV
PVNDPLANSL TVTVPKWIDV LHFNFSYHTE HHLFPAMSSK YYPLVKEHIK RMWPDRYHEL
PMGKALAALW KTPRVYYQQN ELIEPRQGHV YGSLGNGLDP ENITYRNMEA MPFSSLEEKP
IIIKKAVGKE KK