| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3394 |
|---|
| Symbol | |
|---|
| ID | 7976173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 3424199 |
|---|
| End bp | 3425602 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644800159 |
|---|
| Product | PTS system, fructose subfamily, IIC subunit |
|---|
| Protein accession | YP_002951298 |
|---|
| Protein GI | 239828674 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component |
|---|
| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR01427] PTS system, fructose subfamily, IIC component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAACTGC TCGCTGTTAC TTCATGCCCT AACGGTATTG CACACACGTA CATGGCCGCT
GAAAAACTAG CAAAAGCGGC TGAAAAAATG GGACATGAGA TGAAAGTAGA AACACAGGGT
TCGATTGGAG TTGAAAACGA GTTAACTCCA GAAGACATTC AATCTGCAGA TGGCATTATT
ATCGCTGCAG ACAAACAAGT AGATAAAAGT CGCTTTTATG GAAAACGAGT GCTTGAGGCA
TCCGTCACTG ACGGAATCCG TAAACCAGAA GAACTCATTG CTAAATTTGA ACGCAATGAA
GTTCCAGTAT ACGGAAAACC ACAGTCTGAC GCGTTACAAA CGATTGAAGA AGTAAAAAAA
GAAAGAAAAC AAAAACAAAA TCTGGTTTAC CGCAACTTGA TGAATGGAGT TTCGTATATG
ATTCCATTTG TCGTAATCGG CGGACTTTTA ATCGCTCTTT CCCTCGCTAT TGGCGGTGAA
CCAACAGAAA AAGGTCTCGT TATTCCAAAA GGGTCTATAT GGAACGATAT CCTTAATGTA
GGGACAGCCA GCTTTACCTT CATGGTTCCG ATTTTATCTG GTTTTATCGC GATGAGCATT
GCCGATCGCC CTGGACTTGC TCCTGGTATG ATTGGCGGTT ACATTGCAGC AAACGGAAGT
TTTTATCATA GTGAAGCAGG CGCTGGGTTT ATCGGAGGAA TTATCGCTGG ATTTTTAGCT
GGTTACATTG CAAAATGGAT TAAAAGTATT CCTGTTCCGA AAATCATTCA ACCAATTATG
CCAATACTGG TCATTCCATT ATTTTCTTCG ATCCTCGTTG CAATTATTTT CATTTTTATC
CTTGGTCAGC CAATTGCCGG CATTATGGAA TGGCTCACTT CTTGGCTCAA CAGCATGCAA
GGAGCTAGCA AAGTAATTCT CGCCATGATT CTCGGAGCAA TGATCGCATT CGATATGGGA
GGACCCGTCA ATAAAGTTGC CTTTTTATTC GGTTCCGCTA TGATTGCGGA AGGAAACGCT
TATATTATGG GGCCTATTGC TGTAGCGATT TGCATCCCGC CTCTTGGACT AGGATTAGCA
ACTTTACTTA ATAAATCCAA ATTTACAGAA GAAGAACGAG AAGCTGGAAA AGCGGCGCTC
GCTATGGGAC TTGTGGGCAT CACCGAAGGC GCGATTCCAT TTGCGGCGCG CGATCCTCTT
CGTGTCATTC CAAGTATAAT GATTGGTTCT ATGGTAGGGT CCGTCATTGC CATGCTAAGC
GGCGTTACTG ACCATGTACC ACACGGAGGC CCAATCGTGG CAGTATTCCA AGCTGTAGAA
AATGTGCCAA TGTTTTTCGT ATCCATCATT ATTGGAATGA TCGTGACCGC TTTACTAGTC
AATACCATTA AAAAGACAGT TTAA
|
|---|
| Protein sequence | MKLLAVTSCP NGIAHTYMAA EKLAKAAEKM GHEMKVETQG SIGVENELTP EDIQSADGII
IAADKQVDKS RFYGKRVLEA SVTDGIRKPE ELIAKFERNE VPVYGKPQSD ALQTIEEVKK
ERKQKQNLVY RNLMNGVSYM IPFVVIGGLL IALSLAIGGE PTEKGLVIPK GSIWNDILNV
GTASFTFMVP ILSGFIAMSI ADRPGLAPGM IGGYIAANGS FYHSEAGAGF IGGIIAGFLA
GYIAKWIKSI PVPKIIQPIM PILVIPLFSS ILVAIIFIFI LGQPIAGIME WLTSWLNSMQ
GASKVILAMI LGAMIAFDMG GPVNKVAFLF GSAMIAEGNA YIMGPIAVAI CIPPLGLGLA
TLLNKSKFTE EEREAGKAAL AMGLVGITEG AIPFAARDPL RVIPSIMIGS MVGSVIAMLS
GVTDHVPHGG PIVAVFQAVE NVPMFFVSII IGMIVTALLV NTIKKTV
|
|---|
| |