| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3389 |
|---|
| Symbol | |
|---|
| ID | 7976170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 3415980 |
|---|
| End bp | 3417374 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644800154 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_002951293 |
|---|
| Protein GI | 239828669 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACTC CAAAAAATGA ACAAAAATTA CATCGTGGAT TAGAGGAAAG ACATATTTCT
CTTATGTCTC TTGGGGCAGC GATTGGGGTC GGGCTATTTC TTGGCTCTGC ATCTTCCATC
AAATTAGCGG GACCAGCCAT TTTGATTGCT TATGCGGTAA GCGGCGCGGT CATGTTCTTG
ATTATGCGCG CACTCGGCGA AATGGCCGTG GAAAACCCGG TTGCCGGTTC ATTCAGCCGC
TACGCGCATG ACTATTTAGG ACCGCTTGCT GGTTATTTAA CCGGGTGGAA CTATTGGTTT
TTATGGGTAG TTACTTGCAT CGCGGAAATC ACCGCTGCCG GCATTTATAT GCAATTTTGG
TTCCCTGATA CGCCAAGATG GATATGGGCG CTAGCCGCTT TAATAATGAT GACATTAATC
AATTTCCTCG CTGTCAAGGC GTACGGGGAA TTAGAATTTT GGTTTGCGCT TATTAAAATT
GTCACCATTG TATTTATGAT CATCGTTGGC TTGGGCATGA TTCTGTTCGG AATCGGCAAT
GGCGGAGTCG CCACAGGCAT CAGCAACCTT TGGGAACATG GCGGATTTCT CCCGAACGGC
TTTACCGGTG TGTTAATGTC TTTGCAAATG GTGATGTTCG CCTACTTAGG AATTGAAATG
CTCGGCGTTA CGGCCGGAGA AGTAAAAAAT CCGGAGAAAT CGCTTACCCG CGCAATCAAT
ACGGTCTTTT GGCGCATTTT AATTTTCTAC GTGGGCGCAT TATTTGTCAT CATGTCCATT
TACCCTTGGA ACGAAATCGG CGAAAAAGGA AGCCCGTTTG TCTTAACATT TGAAAAAATC
GGCATTCACG CCGCTGCGGG AATCATCAAC TTTGTCGTTT TAACGGCTGC GTTGTCTTCC
TGCAACAGTG GAATTTTCAG CACAAGCCGC ATGCTCTTCA ACTTGGCTGA GCAAAAAGAA
GCACCGCCTT CCTTCGCTAA ACTGACAAAG CGCGGAATTC CAGGCGTCGC CCTCATCGTC
ACGGCGTTAG CGATGTTAGT CGGTGTGTAT TTAAACTACG TTTCCGAAAA AGTATTCCAA
TGGGTCACAA GTGTCGCGAC ATTTGGCGCG ATTTGGACAT GGGCGATTAT TTTGCTTTCG
CAATTGCACT TCCGTAAACG CTTAAGCCCA GAAAAGCAAA AACAATTAAA GTATAAAATG
CCGCTTTATC CTTATAGCTC TTATATCGCT CTCGCCTTTT TAGTCGGAGT TGTCGGTTTA
ATGGCATATT TCCCTGACAC ACGAATCGCA CTTATCATTG GACCAGCCTG GCTCATCTTG
CTCGTTGTCG TCTATTATGC AAAAGGCATG CATAAGCGCC ATGCCTACCC TTCTGATAAA
AAACAAGTTA GCTAA
|
|---|
| Protein sequence | MQTPKNEQKL HRGLEERHIS LMSLGAAIGV GLFLGSASSI KLAGPAILIA YAVSGAVMFL
IMRALGEMAV ENPVAGSFSR YAHDYLGPLA GYLTGWNYWF LWVVTCIAEI TAAGIYMQFW
FPDTPRWIWA LAALIMMTLI NFLAVKAYGE LEFWFALIKI VTIVFMIIVG LGMILFGIGN
GGVATGISNL WEHGGFLPNG FTGVLMSLQM VMFAYLGIEM LGVTAGEVKN PEKSLTRAIN
TVFWRILIFY VGALFVIMSI YPWNEIGEKG SPFVLTFEKI GIHAAAGIIN FVVLTAALSS
CNSGIFSTSR MLFNLAEQKE APPSFAKLTK RGIPGVALIV TALAMLVGVY LNYVSEKVFQ
WVTSVATFGA IWTWAIILLS QLHFRKRLSP EKQKQLKYKM PLYPYSSYIA LAFLVGVVGL
MAYFPDTRIA LIIGPAWLIL LVVVYYAKGM HKRHAYPSDK KQVS
|
|---|
| |