| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3352 |
|---|
| Symbol | |
|---|
| ID | 7977110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 3380417 |
|---|
| End bp | 3382468 |
|---|
| Gene Length | 2052 bp |
|---|
| Protein Length | 683 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644800119 |
|---|
| Product | penicillin-binding protein, 1A family |
|---|
| Protein accession | YP_002951258 |
|---|
| Protein GI | 239828634 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00461101 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAATCA TTCCAAGCAG CCGGTTTCGC GGAACATGGA AATACATTCG GGCGTTCGTT
TTTATTAGTT TTATCCTAGC AATCTTATTC GTTGTTACGC TTGCCGGTTT GATCGCGTTT
GCCAAATTAA AAGGAGCCCC GCCTTTAGCA GTGCCGCAAA CGACGATTTT TTATGCAGAT
GATGGCACAA AAATCGGCGA GAGCGATAAC GGGCAGACGC GTTACTGGGT AGACCTTGAT
GATATATCCC CCTATATTGT ACAAGCAACG GTTGCTGTAG AAGATCGGAA ATTTTATGAA
CATCACGGCT TTGATATAAA ACGCATTATC GGGGCCATTA TTGCCGATAT AAAGGCGATG
GCGAAAGTGC AAGGAGCAAG CACCATCACC CAGCAATATG CGCGAAATTT ATTTTTGAAT
CACGAGAAAA CATGGACGCG GAAATTGCAA GAAGCATTAT ATACGATTCG CCTCGAAGCG
AATTACAGCA AAAAACAAAT TTTAGAAGGA TACTTAAACA CCATTTACTA CGGCCATGGC
GCTTACGGAA TTGAAGCGGC TGCTCATCAT TATTTTGGAA AACCGGCAAA ACAGCTTACC
TTAAGCGAAG CGGCAATGTT AGCCGGAATT CCGAAAGGTC CATATTACTA TTCGCCACTT
ATTGATGAGA AGCGGGCAAA AGCGCGGCAA AAAACGGTGC TTTTGTCAAT GGCGGAAACT
GGATACATCA GCAAAAAAGA AGCGGAACAA GCGTATAAAG AACCGCTTGT TTATTCTCCC
CATCACAAAA TAGAAACGAA AAAGATCGCC CCTTATTTTC AAGATGTAGT GAAATATGTG
CTGCGAAATC AATTAGGATT GGATGAACGC ACGATTGAAA TGGGCGGATT GCGCGTGTAT
ACATCGCTGA ATACGAAAAT GCAGGAAACT GCGGAACAAA ACATTCATGA CATCATTGAC
CCTCACTCGA ACATTCAAGC GGCACTTGTA GCGATGGATC CGCGCACAGG AGAAGTAAAA
GCGCTCGTCG GCGGCAGAGA TTACAACAAA AGCCCTTTCA ACCGCGCCGT GCAAGCGGAA
CGGCAGCCGG GTTCTACATT TAAACCGTTT CTATACTATG CGGCCATTGA ACAAGGATTT
ACGCCGTCGA CACAAATGCG AAGCGAGTTG ACCACCTTTG CCTTTGACAA TGGAAAAGCA
ACATATACAC CACATAACTA CAATAACTAC TATGCGAACG ACTCGATTAC GCTCGCTCAA
GCCATCGCGC TATCAGACAA CGTATTTGCT GTAAAAACGC ATTTGTTTAT CGGGGAGGAA
AAACTGGTAG AGACAGCGAA AAAACTAGGC ATTACAAGCA AATTAAAAGC TGTTCCTTCA
CTCGCGCTCG GAACATCGCC GGTGAAAGTG ATCGATATGG TGAAAGCTTA CAGCGTATTT
GCCAATAACG GCAAAAAAGT CGAGCCAGTT TTTATTAAAA AAGTCGTCAA TCATCATGGA
GAAACAATTT ACGAATACAA ACCATCAAGC AAACAAGTGC TAGATCCGGA CGCTGCATAT
GTAACGACCC AGCTGATGAC AGGCATGTTT GATCCGAAAT TAAATGATTA TACAACGGTG
ACCGGTCAAT CGATTCGAAA GGAGATCACT CGCCCTTACG CAGGAAAATC AGGAACAACC
AAAACGGATA GCTGGATGAT TGGCTTTGCG CCACAACTAG TTGCAGGGGT ATGGACCGGT
TACGACCATA GCGAAACGAT TGATAAAATT GCGGAGAAAC AATATGCAAA ACAAATTTGG
GTGCAATTTA TGGAAAAAAG TTTGCAAGGA AAACCAAAGA AAAAGTTTAA ACCAACCAAA
GGGGTCGTTG GTGTCTATGT CGACCCGGAT AACGGCAAAC TTGCGACAAA GTCATGTCCG
GTAAAGCGTC TTACTTATTA TATCTCTGGC TCAGAACCGA ACGACTACTG CACCGACCAT
TTACATCAAA AGAAATCAAA GAAAAAAGAA AAGCAGAAAA ATTGGTTTGA AAAACTGTTC
CCTTGGTTCT AA
|
|---|
| Protein sequence | MEIIPSSRFR GTWKYIRAFV FISFILAILF VVTLAGLIAF AKLKGAPPLA VPQTTIFYAD
DGTKIGESDN GQTRYWVDLD DISPYIVQAT VAVEDRKFYE HHGFDIKRII GAIIADIKAM
AKVQGASTIT QQYARNLFLN HEKTWTRKLQ EALYTIRLEA NYSKKQILEG YLNTIYYGHG
AYGIEAAAHH YFGKPAKQLT LSEAAMLAGI PKGPYYYSPL IDEKRAKARQ KTVLLSMAET
GYISKKEAEQ AYKEPLVYSP HHKIETKKIA PYFQDVVKYV LRNQLGLDER TIEMGGLRVY
TSLNTKMQET AEQNIHDIID PHSNIQAALV AMDPRTGEVK ALVGGRDYNK SPFNRAVQAE
RQPGSTFKPF LYYAAIEQGF TPSTQMRSEL TTFAFDNGKA TYTPHNYNNY YANDSITLAQ
AIALSDNVFA VKTHLFIGEE KLVETAKKLG ITSKLKAVPS LALGTSPVKV IDMVKAYSVF
ANNGKKVEPV FIKKVVNHHG ETIYEYKPSS KQVLDPDAAY VTTQLMTGMF DPKLNDYTTV
TGQSIRKEIT RPYAGKSGTT KTDSWMIGFA PQLVAGVWTG YDHSETIDKI AEKQYAKQIW
VQFMEKSLQG KPKKKFKPTK GVVGVYVDPD NGKLATKSCP VKRLTYYISG SEPNDYCTDH
LHQKKSKKKE KQKNWFEKLF PWF
|
|---|
| |