Gene GWCH70_3329 details

Gene Information

• Locus tag: GWCH70_3329
• Symbol: rho
• ID: 7977092
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. WCH70
• Kingdom: Bacteria
• Replicon accession: NC_012793
• Strand: -
• Start bp: 3352876
• End bp: 3354150
• Gene Length: 1275 bp
• Protein Length: 424 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 644800096
• Product: transcription termination factor Rho
• Protein accession: YP_002951235
• Protein GI: 239828611
• COG category: [K] Transcription
• COG ID: [COG1158] Transcription termination factor
• TIGRFAM ID: [TIGR00767] transcription termination factor Rho

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000488877
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGTTAA CACTTTCTAC ATTAGAAAAT ATGAAACTGA AAGAGCTCTA TGAGCTTGCT 
CGCCAATATA AAATTTCTTA TTACAGTAAG CTAACAAAAA AAGAGCTTAT TTTTGCCATT 
TTGAAAGCGC GTGCGGAACA AGATGGATTG TTTTTTATGG AGGGCGTGCT TGAAATCATT 
CAATCAGAAG GATTCGGCTT TTTACGTCCG ATCAACTATT CCCCAAGCTC CGAAGATATT 
TATATTTCCG CGTCACAAAT TCGCCGATTT GATTTGCGAA ACGGGGATAA AGTGTCTGGA 
AAAGTGCGTC CTCCAAAAGA AAATGAACGC TATTTCGGAT TGCTTCATGT CGAAGCAGTC 
AATGGCGAAG ACCCAGAAGT CGCAAAGGAA CGCGTGCACT TCCCGGCATT AACACCTTTA 
TACCCAAATC GACAAATGAA ATTAGAAACA ACCCCGGACA AGCTATCAAC GAGAATTATC 
GACTTAATTG CCCCGGTCGG ATTCGGGCAG CGCGGATTGA TTGTAGCTCC TCCAAAAGCG 
GGAAAAACGA TGTTATTAAA AGAAATCGCC AACAGCATCA CGACCAATCA TCCAGAAGTA 
GAACTCATTG TTCTCCTCAT TGACGAACGT CCAGAGGAAG TAACAGACAT CGAGCGGTCG 
GTCAATGGTG ACGTTGTCAG CTCGACGTTT GACGAAGTGC CGGAAAATCA TATTAAAGTA 
GCGGAATTAG TGTTAGAAAG AGCGATGCGT CTTGTCGAAC ATAAACGAGA TGTCGTTATT 
CTTATGGATA GCATCACTCG TTTAGCACGC GCTTATAACT TAGTCATCCC GCCAAGCGGC 
CGCACGCTTT CAGGGGGGAT TGATCCGGCT GCGTTCCACC GTCCGAAACG GTTTTTCGGG 
GCGGCCCGCA ATATTGAAGA AGGCGGCAGT CTAACGATTT TAGCTACTGC TCTTGTTGAT 
ACAGGTTCGC GTATGGATGA TGTTATATAC GAGGAATTTA AAGGCACCGG AAATATGGAA 
CTCCATCTTG ACCGATCGCT GGCGGAGCGG CGTATTTTCC CAGCCATCGA TATTCGTCGC 
TCAGGTACGC GTAAAGAAGA GTTGCTCATT CCGAAAGAGC ATCTTGAAAA ATTATGGGCG 
ATTCGAAAAA CAATGTCTGA TTCCCCTGAT TTCATTGAGC GGTTCTTAAG CAAACTCCGT 
CAAACAAAAT CAAACGAAGA ATTTTTTGCG ATGCTTGATG AAGAATGGAA AAGTAATGGA 
GCCGTGCGAA TTTAA 

 

Protein sequence

MELTLSTLEN MKLKELYELA RQYKISYYSK LTKKELIFAI LKARAEQDGL FFMEGVLEII 
QSEGFGFLRP INYSPSSEDI YISASQIRRF DLRNGDKVSG KVRPPKENER YFGLLHVEAV 
NGEDPEVAKE RVHFPALTPL YPNRQMKLET TPDKLSTRII DLIAPVGFGQ RGLIVAPPKA 
GKTMLLKEIA NSITTNHPEV ELIVLLIDER PEEVTDIERS VNGDVVSSTF DEVPENHIKV 
AELVLERAMR LVEHKRDVVI LMDSITRLAR AYNLVIPPSG RTLSGGIDPA AFHRPKRFFG 
AARNIEEGGS LTILATALVD TGSRMDDVIY EEFKGTGNME LHLDRSLAER RIFPAIDIRR 
SGTRKEELLI PKEHLEKLWA IRKTMSDSPD FIERFLSKLR QTKSNEEFFA MLDEEWKSNG 
AVRI