Gene GWCH70_3322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_3322 
SymbolprfA 
ID7977087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp3344631 
End bp3345707 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content45% 
IMG OID644800089 
Productpeptide chain release factor 1 
Protein accessionYP_002951228 
Protein GI239828604 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000442042 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTGAAC GTCTGGAAGC AGTAGAAGAA CGTTATGAAA AATTAAATCA ACTGCTCATG 
GATCCGGAAG TCATTAACGA TCCAAAAAAA CTTCGCGACT ATTCGAAAGA GCAATCGGAT
TTATCAGAAA CGGTACAAAC GTATCGCGAA TACAAATCGG TCCGCAAGCA GCTGGATGAG
GCAAAAGCGA TGTTAGAAGA GAAGCTTGAT CCAGAAATGC GGGAAATGGT GAAAGAAGAA
ATTGATGAGT TGGAACAAAA AGAAGAAGAG CTTGTCAATA AGTTAAAAAT TCTTCTTCTT
CCGAAAGATC CGAACGATGA GAAAAACGTT ATTATGGAAA TCCGTGCCGC GGCAGGCGGC
GAGGAAGCGG CGCTATTTGC CGGCGACTTG TACCGGATGT ATACACGCTA TGCGGAATCG
CAAGGATGGA AAACGGAAGT TATTGAAGCG AGTCCGACCG GGCTTGGAGG ATATAAAGAA
ATTATTTTTA CGATTATCGG AAAAGGAGCG TATTCCAAGC TGAAATACGA AAACGGCGCG
CACCGAGTGC AGCGCGTCCC GGAAACGGAA TCTGGCGGAC GTATTCACAC ATCGACGGCA
ACGGTTGCTT GTTTGCCGGA AATGGAAGAA ATCGAAGTCG AAATTAACGA AAAAGATATT
CGCGTCGATA CGTTTGCATC GAGCGGACCG GGTGGACAAA GCGTGAACAC CACGATGTCG
GCGGTTCGTT TGACGCACAT TCCAACGGGA ATTGTCGTAA CGTGCCAAGA CGAAAAATCG
CAAATTAAAA ACAAAGAAAA AGCAATGAAA GTGTTACGCG CCCGCATTTA TGACAAATAC
CAACAAGAAG CGCGCGCGGA ATACGATCAG ACGCGCAAAC AAGCAGTTGG AACAGGGGAT
CGTTCGGAGC GAATTCGCAC GTATAACTTC CCGCAAAACC GTGTGACCGA TCATCGCATT
GGATTGACGA TTCAAAAGCT TGACCAAGTG TTAGACGGCA ACCTCGATGA AATTATTGAA
GCACTGATAT TAGACGATCA ATCAAAAAAA TTGGAGCAAG CGAACAATGA GCTATAA
 
Protein sequence
MFERLEAVEE RYEKLNQLLM DPEVINDPKK LRDYSKEQSD LSETVQTYRE YKSVRKQLDE 
AKAMLEEKLD PEMREMVKEE IDELEQKEEE LVNKLKILLL PKDPNDEKNV IMEIRAAAGG
EEAALFAGDL YRMYTRYAES QGWKTEVIEA SPTGLGGYKE IIFTIIGKGA YSKLKYENGA
HRVQRVPETE SGGRIHTSTA TVACLPEMEE IEVEINEKDI RVDTFASSGP GGQSVNTTMS
AVRLTHIPTG IVVTCQDEKS QIKNKEKAMK VLRARIYDKY QQEARAEYDQ TRKQAVGTGD
RSERIRTYNF PQNRVTDHRI GLTIQKLDQV LDGNLDEIIE ALILDDQSKK LEQANNEL