| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3299 |
|---|
| Symbol | |
|---|
| ID | 7977205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3325985 |
|---|
| End bp | 3327211 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644800066 |
|---|
| Product | NADH dehydrogenase subunit C |
|---|
| Protein accession | YP_002951205 |
|---|
| Protein GI | 239828581 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAG AAAAAGATTT ACAGCAGCGG AAAAAAGAAG CGGCAGAGCG AGCGAGACAG
TTGGCTCGCG AACGATTAGC GGCGAAACGA GCCGCTGAAC AAACTGAACA GCCGCTCGAA
GAACCAAAAG TCCCAACCGA AGAAAAACTT GCCGAAGACG ATCTCACCCT TGCGAAGAAG
AAAGCAGCAG CGGCAGCGAA AGCCAAAGCG GCGGCGTTGG CGAAACAAAA AGCAAAAGAA
GCGCAGCAGG CAGAAGGAGA AAACCAAGAA ACAGCCGAAG ACGATCTCAC CCTTGCGAAG
AAGAAAGCAG CAGCGGCAGC GAAAGCCAAA GCGGCGGCGT TGGCGAAACA AAAGGCAAAA
GAAGCGCAGC AGGCAGAAGG AGAAAACCAA GAAACAGCCG AAGATGATCT AGCGCTTGCG
AAGAAGAAAG CAGCAGCGGC AGCAAAAGCC AAAGCGGCGG CGCTAGCGAA ACAAAAGGCA
AAAGAAGCAG CGGACGACGG AGCGGAAGAA GACCTTGCCA AACAAAAAGC GATTGCGGCA
GCGAAGGCGA AGGCGGCAGC CGCTGCAAAA GCCAAAGCAA AAGCGCTGGC AAAACAACAA
GCAAGCGGCA CCGCTGGCGA AAACGATGAT GATCTCGCAA AAGCGAAAGC AAAGGCAGCA
GCGGCAGCAA AAGCCAAAGC AGCGGCTGCG GCGAAAGCGA AAGCCGCAGG AGATTCAGGG
CCAGCAGCGA AAAAAGAAGA AACTCCATCG CCAAATCAGC CGCTTCTTGA TAAATACGTC
AAAGTGATTC GCGAACATCT CGGCGAAGAT GTGCTAGAAG ATGCCTATAT TAACCGCCTT
TCCAAAGATG TTCCGACATT GGTCGCAAAA AAGGATACAT ATTACAAAAT CGCCGAGTTT
CTAAAATATA ACGAACAGCT TAGTTTTGAT TATTTGTCGG AGCTGCATGG AACGGATTTC
CAAACACATA TGGAAGTATA TGTGCACTTA TATTCTTATA AAAAACGACA AGCTGTCGCA
TTAAAAGTGA AAATCGACCG CGACCAGCCG GAGATTGATT CGCTCGTTCC GCTTTGGCAG
GGGGCAAATT GGCCGGAATG CGAGGCGTAC GACCTATTAG GAATCCGCTT TAAAGGGCAC
CCGAATTTAA TCCGTATCTT TTTAGGAGAA GATTGGGTCG GATATCCGCT TCGCAAAGAT
TATGAACCAT ACGACGCGGA GGTATAA
|
|---|
| Protein sequence | MSEEKDLQQR KKEAAERARQ LARERLAAKR AAEQTEQPLE EPKVPTEEKL AEDDLTLAKK
KAAAAAKAKA AALAKQKAKE AQQAEGENQE TAEDDLTLAK KKAAAAAKAK AAALAKQKAK
EAQQAEGENQ ETAEDDLALA KKKAAAAAKA KAAALAKQKA KEAADDGAEE DLAKQKAIAA
AKAKAAAAAK AKAKALAKQQ ASGTAGENDD DLAKAKAKAA AAAKAKAAAA AKAKAAGDSG
PAAKKEETPS PNQPLLDKYV KVIREHLGED VLEDAYINRL SKDVPTLVAK KDTYYKIAEF
LKYNEQLSFD YLSELHGTDF QTHMEVYVHL YSYKKRQAVA LKVKIDRDQP EIDSLVPLWQ
GANWPECEAY DLLGIRFKGH PNLIRIFLGE DWVGYPLRKD YEPYDAEV
|
|---|
| |