| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3254 |
|---|
| Symbol | |
|---|
| ID | 7977164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3281308 |
|---|
| End bp | 3282021 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644800025 |
|---|
| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
|---|
| Protein accession | YP_002951164 |
|---|
| Protein GI | 239828540 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAG CTATTATATT TGATCTCGAT GATACTCTTT TTCCAGAAAG TGAGTTTGTG
AAAAGCGGTT TTATAGCAGT AGATAACTAT TTAAGACAAC AAGGAGTTGT GGGTTTTTAT
CGAGAGGCTC TTTATTTGTT TAATCAAGGA GCAAGGGGCA ATATATTTAA TTTAGCGCTC
GATCAATTAA AAATCGATTA TGATTCGGGC TTTATCAACA AGCTTGTTGC TGTTTACAGA
GAACATTTGC CGACTATTGT GCTTCACGAA GATGCAAAAT GGGCGATCCA ATATTTAAAA
GATAAATATA AACTTGGGAT TATTACAGAT GGATTTTTAG TAACCCAAAA AAATAAGGTA
AAAGCGTTGG GAATTGTCGA TGACTTTGAT GTAATTGTTT TTAGTGATGC ATACGGAAGA
GAAAACTGGA AACCAAGTTC TGTTCCTTAT GCGAAAGTGA TGGAAGCACT TCAACTTAAA
GGCGAACAAC TTATTTATGT GGGAGATAAT CCCGCAAAAG ATTTTGTCAC TGCTAAAAAG
ATGGGATGGT TAACGATTCA AATTAAAAGG AAACAAGGAG AATATTTAAA TATAGAGGTT
TCCGAAGAAT ACCAAGCTCA TTTCGTAATT GAATCTTTAT TTGAGTTAAA AAATCTATTA
TTAGATCTGG AGAAAGAAAA CAACTCAAAG TTTGAAGGTG TAGAAAATGT CTAA
|
|---|
| Protein sequence | MIKAIIFDLD DTLFPESEFV KSGFIAVDNY LRQQGVVGFY REALYLFNQG ARGNIFNLAL
DQLKIDYDSG FINKLVAVYR EHLPTIVLHE DAKWAIQYLK DKYKLGIITD GFLVTQKNKV
KALGIVDDFD VIVFSDAYGR ENWKPSSVPY AKVMEALQLK GEQLIYVGDN PAKDFVTAKK
MGWLTIQIKR KQGEYLNIEV SEEYQAHFVI ESLFELKNLL LDLEKENNSK FEGVENV
|
|---|
| |