| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3227 |
|---|
| Symbol | |
|---|
| ID | 7977141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3262756 |
|---|
| End bp | 3264003 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644800007 |
|---|
| Product | transposase, IS605 OrfB family |
|---|
| Protein accession | YP_002951146 |
|---|
| Protein GI | 239828522 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATTTTT GTATCAAACA ACAGCTAAAT GGTTTGACCA AAGAAGAATA CTTGACTCTT
CGAGAACTGT GCCATATTGC CAAGAACATG TACAACGTCG GATTGTACAA TGTCAGACAA
TACTATTTTG AACACAAGGA ATTTCTTAAT TATGAGAAAA ACTATCATCT TGCCAAAACG
AACGAAAACT ATAAGCTGTT AAACAGCAAC ATGGCACAGC AAATTTTAAA AAAGGTTAAT
GAGGCTTTTA AATCTTTCTT TGGCTTAGTA AAACTAGCCA AACAAGGCAA ATATGACTAC
AAGGCTATCA GTATCCCAAA ATATCTTAAA AAAGATGGCT TTCATTCACT AATCATTGGT
CAAATTCGTA TAGACGGCAA CAAATTCACG ATACCGTATT CGAATCTGTA TAAAAAGACT
CATAAGCCTA TCACGATAAC GATTCCGCCT GTGTTACTGG ACAAAAAGAT TAAGCAGATT
GAAATCATTC CTAAACATCA TGCCAGGTTC TTTGAGATTC AGTACAAATA TGAAATGCCT
GAAGATCAAA GAGAATTAAA TGACCAAAAA GCACTGGCGA TTGATTTAGG AGTGAATAAT
CTTGCCACTT GTGTCACATC AGACGGCAGA TCGTTCATCA TTGATGGGCG GAGATTAAAA
AGTATTAATC AATGGTTTAA CAAAGAAAAT GCCAGACTTC AAAGCATGAA AGATAAGCAA
AAAATCAAAG GTACAACCCG TAAACAAGCT TTGCTTGCTA TGAATCGCAA TAATAAAGTG
AATGATTATA TCAACAAGAC TTGCCGTTAC ATCATAAACT ACTGTATTGA AAATCAAATT
GGCAAACTTG TCATTGGCTA TGCGGAAACA TGGCAACGCA ATATTAATCT AGGAAAAAAG
ACAAATCAAA ACTTTGTCAA TATTCCTCTC GGTAACATAA AAGAAAAACT AGAATATCTT
TGTAAATTTT ACGGCATTGA ATTCTTGAAA CAGGAAGAAT CATATACGTC TCAAGCCAGC
TTTTTTGACG GGGATGAGAT TCCTGAATAT AATGCCGACA ATCCAAAAGA ATATAAGTTC
AGCGGCAAAC GTATTAAGCG CGGCTTGTAT CGAACAAAGT CTGGCAAACT AATTAATGCT
GATGTAAATG GTGCATTAAA CATCTTAAAG AAAAGTAAAG CTGTAGACCT GAGTGTCTTA
TGCTCTAGCG GCGAAGTGGA CACGCCTCAA AGAATAAGGA TTGCTTAA
|
|---|
| Protein sequence | MYFCIKQQLN GLTKEEYLTL RELCHIAKNM YNVGLYNVRQ YYFEHKEFLN YEKNYHLAKT
NENYKLLNSN MAQQILKKVN EAFKSFFGLV KLAKQGKYDY KAISIPKYLK KDGFHSLIIG
QIRIDGNKFT IPYSNLYKKT HKPITITIPP VLLDKKIKQI EIIPKHHARF FEIQYKYEMP
EDQRELNDQK ALAIDLGVNN LATCVTSDGR SFIIDGRRLK SINQWFNKEN ARLQSMKDKQ
KIKGTTRKQA LLAMNRNNKV NDYINKTCRY IINYCIENQI GKLVIGYAET WQRNINLGKK
TNQNFVNIPL GNIKEKLEYL CKFYGIEFLK QEESYTSQAS FFDGDEIPEY NADNPKEYKF
SGKRIKRGLY RTKSGKLINA DVNGALNILK KSKAVDLSVL CSSGEVDTPQ RIRIA
|
|---|
| |