| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3154 |
|---|
| Symbol | |
|---|
| ID | 7977009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3180909 |
|---|
| End bp | 3181880 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644799940 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002951079 |
|---|
| Protein GI | 239828455 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACAG CAAAGGCAGT ATCGGAACGA AGCGTGACAG TCGTTCCAAA GTCGCAAAAA
AAGCGGAAAT GGACGGTAGA CCATTGGCTT GCACTTGCAT TTCTATCGCC ATCGGTTGTG
CTTATTTTGA TTTTCGTGTA TGGATTTATC GGCTGGACGG GATATGTTTC TCTCAGCAAT
TGGAATTCCC TTGTACCTGA CTTGTCGTTT GCAGGACTGA AAAACTATAT CTATTTATTT
CATGATTTCC GTTTTCAAGC CGATTTGCGG AATACACTTG TCTTTACGGT CTTGTTCATC
GGTGTCGTGA TTGTGCTTGG ACAATTGTTG GCGATTTTGT TGGATCAAAA ATTGCGCGGC
GAATCGATTT TCCGTAACAT TTTCTTTTTC CCGATGGCGT TATCGTTTGT CGTAACAGGG
GTTGTTTGGC AATGGCTATT AAACCCGTCA ACAGGGGTCA ACTTGTTTTT AAAAAAATTT
GGATTGGACT CGAAGTGGTA CACAGATACA AACATTTTAG GAGGTTTCCA CATAGGGAAA
ATTGAATTTG GCGTGCCGGT GGCGATCGTG GCGGTGGTGA TTGCCGCTGT ATGGCAAATG
ACGGGATTTG CGGTCGCGAT GTATTTGGCA GGATTAAGAG CGATTCCGGA AGAAGTGCGG
GAAGCGGCGC GAATGGATGG CGCCACGGAG TTCCAAATTT ATCGTAAAAT TATTATCCCG
ATGTTACGGC CAATTACGGT CAGTGTCATC ATCATTATGG CCCACATTTC GCTGAAAATC
TTTGACCTGA TTTACGCGAT GACTGGCCCT GGAGCAAACT TTGTCACAGA CGTGCCGGGA
GTATATATGT TTGAAACGAC GTTCCGCGGC AACTACTACG CAAACGGAGC GGCGATCGCG
ATCATTATGC TGCTTTCTGT GGCTATTTTT ATCGTTCCAT ATTTGATTTC AAGCCGAAAG
GGTGAATCAT GA
|
|---|
| Protein sequence | METAKAVSER SVTVVPKSQK KRKWTVDHWL ALAFLSPSVV LILIFVYGFI GWTGYVSLSN
WNSLVPDLSF AGLKNYIYLF HDFRFQADLR NTLVFTVLFI GVVIVLGQLL AILLDQKLRG
ESIFRNIFFF PMALSFVVTG VVWQWLLNPS TGVNLFLKKF GLDSKWYTDT NILGGFHIGK
IEFGVPVAIV AVVIAAVWQM TGFAVAMYLA GLRAIPEEVR EAARMDGATE FQIYRKIIIP
MLRPITVSVI IIMAHISLKI FDLIYAMTGP GANFVTDVPG VYMFETTFRG NYYANGAAIA
IIMLLSVAIF IVPYLISSRK GES
|
|---|
| |