| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3129 |
|---|
| Symbol | |
|---|
| ID | 7976773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3157144 |
|---|
| End bp | 3157707 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644799915 |
|---|
| Product | transposase of IS653-like element |
|---|
| Protein accession | YP_002951054 |
|---|
| Protein GI | 239828430 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3415] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTC TCAACATCAC CGACAACCAT GGATGGACGC CCCGGAAACT CCGCAAGCAG
GAACGGAAGA TCAAAAACGC TCATCTCCGC CAACGTGTGA TGGCCGTCCG CCTGGTCATG
GAAGGCTATT TGGGCAAAGA CGTGGCCTCC ATGGTCAACG TGTGCCGCCA AACCGTTTCC
CATTATGTGT CGCTGTTTAA CGAAGGGGGC CTGGAACTCC TGCTTCATCG GGATTTTGCC
CCTGGGCGAG AGCCGTTTCT CACCGAAGAA CAGCAGGAAG AGATCAAACA CCTTGTGTTG
ACCACGACAC CCGCGGAGCT GGGCTGGGAC ATCGCTTCGG CGTGGAATAC GAAGATCCTT
CAATCCTATG TACACCACCA TTATGGCATC TCCATATCCC GCGAAGCCTT GCGAAAACTC
TTGCATCGAA AAGGGCTTTC GTGGACCCGG CCGACTTACA CGTTGGCGAA AGGAGATCCG
GATCGGCAAA AACACTTCGA AAAACAAATG GATCTAATAA AAAAACTTAA TCGATCCAGA
TTCCGTCCTG TTGTACATCG ATGA
|
|---|
| Protein sequence | MKRLNITDNH GWTPRKLRKQ ERKIKNAHLR QRVMAVRLVM EGYLGKDVAS MVNVCRQTVS
HYVSLFNEGG LELLLHRDFA PGREPFLTEE QQEEIKHLVL TTTPAELGWD IASAWNTKIL
QSYVHHHYGI SISREALRKL LHRKGLSWTR PTYTLAKGDP DRQKHFEKQM DLIKKLNRSR
FRPVVHR
|
|---|
| |