| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3124 |
|---|
| Symbol | |
|---|
| ID | 7976769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 3151204 |
|---|
| End bp | 3152619 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644799910 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase |
|---|
| Protein accession | YP_002951049 |
|---|
| Protein GI | 239828425 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
|---|
| TIGRFAM ID | [TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0129818 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAGG GATTATTTGT CGCTTTTTGT CTATGGTTGG TCGTAGGACT CATTATTCCT
GCTGGTCATA CTAGTGCTGC ACCATATTTT TATGATGTTG GTACGACTCA TCGCGCTGCA
AACGAGATTA ATTATTTAGC GAAGGGGAAA ATCGTTCAAG GTAGTTTATC TGGATACTTT
TATCCATATA AAAATGTGAC AAGAGCAGAG GCTGCTGCCA TTATCGGAAG AACGCTTAAT
TTCGATGGAA CACAGAGGGC TACGAAATTT AAAGATGTGG GCAAAGGGAA TTTTGCTTCC
GGATACATAC AAGAAGCAGT TGAAAAAAAC ATTATTAGCG GCTACAAAGA CGGTACTTTT
CGTCCTGACC AATTCGTTAC ACGGGGAGAA ATGGCGTTGC TTCTTAACCG TGCTTATTCG
CTTGGTGGAA ATACGATATC GGCAGCGATT CAGCAACTAA AGATGAAAGG GATTGCCCAA
GGGCTCGCTG ATGGAACGTT TGGTCAAGAT CAGCCGATTA TCCGTGCCGA TTTTGCGGTG
TTTGTTGCAA AAGCCATTAA TCCAAAATTC CGGATCAATT ATCAAGCAAC AGCTATTCAA
CAAGCTACGG TAAATGCGTT AACTCTGAAT GTTCGTCAAG GACCATCCAC CAACTTTGAT
GCTGTGGCTG TCCTGAAAAA AGGACAAAAA GTGGAGATTT TACATATTGT CGGCAGCTGG
GCATACGTTC GCGCTTCGGG AATGGAAGGT TTTGTACATA CTGCTTACCT TAGCGGAATC
AGTCAATCTA ATCCAGCTGG TCCATCGGAC AAGCTGCTGG AATATGTAAA AACGCAAACC
ATCATTATTG ATCCTGGTCA TGGCGGCAGC GATCCTGGCG CGGTGGCGAA TGGATTAAGA
GAAAAGGATA TTAATCTTAG TGTCGCTTTA AAAGTACAAT CATTATTTAA AGATACAGGA
TTTAATATTG CTTTAACGCG GGAAAAAGAT GTATTTGTTT CGCTGAGTGG CAGGGTTGAT
TTTGCGAAAA AGATGAATGG AGATATATTT GTCAGCATTC ATACCAATTC TGGTGGCGGA
ACTGGTACGG AAACGTACTA TTATAGCGCG GCAGCGACAA ATCCGTATGT AGAAAAGAGC
AAAAAGCTCG CCCAATGTAT CCAAAAACGG TTAGTCGAAG CATGGAATGC AACGGACCGT
GAAGTGAAAA GAGGCAATTT GCATGTTCTT CGCGAAAATA ATATGCCTGC TGTTCTAGTT
GAGTTAGGCT TCATTGATCG TAAAGAAGAT GCCGCAAAGT TGGGTTCTTC ATATTGGCAG
GAAAAAGCAG CAAAGGCAAT TTATCTTGGA ATCTTAGATT ATTACGCATC TGAATCAGGA
TTGAACTTCC AGCCTTTATA TGACCGTGTT CAATAA
|
|---|
| Protein sequence | MRKGLFVAFC LWLVVGLIIP AGHTSAAPYF YDVGTTHRAA NEINYLAKGK IVQGSLSGYF
YPYKNVTRAE AAAIIGRTLN FDGTQRATKF KDVGKGNFAS GYIQEAVEKN IISGYKDGTF
RPDQFVTRGE MALLLNRAYS LGGNTISAAI QQLKMKGIAQ GLADGTFGQD QPIIRADFAV
FVAKAINPKF RINYQATAIQ QATVNALTLN VRQGPSTNFD AVAVLKKGQK VEILHIVGSW
AYVRASGMEG FVHTAYLSGI SQSNPAGPSD KLLEYVKTQT IIIDPGHGGS DPGAVANGLR
EKDINLSVAL KVQSLFKDTG FNIALTREKD VFVSLSGRVD FAKKMNGDIF VSIHTNSGGG
TGTETYYYSA AATNPYVEKS KKLAQCIQKR LVEAWNATDR EVKRGNLHVL RENNMPAVLV
ELGFIDRKED AAKLGSSYWQ EKAAKAIYLG ILDYYASESG LNFQPLYDRV Q
|
|---|
| |