Gene GWCH70_3120 details

Gene Information

• Locus tag: GWCH70_3120
• ID: 7976765
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. WCH70
• Kingdom: Bacteria
• Replicon accession: NC_012793
• Strand: -
• Start bp: 3142217
• End bp: 3144100
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 644799906
• Product: S-layer domain protein
• Protein accession: YP_002951045
• Protein GI: 239828421
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG4193] Beta- N-acetylglucosaminidase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGGTTAC TTGTCAGTCT TTTTCTAGTT TTTTGCTTAT TTTTTGCCAA TATTTCCGTT 
TCATTCGCAG ATGATATTAC AGGAATTGCG CTTGAAAAAG AAATGCGCGC GATGGTGAAT 
CAAGGAGTCG TTCAAGGATA TCCTGATGGC AAATATCGTC CGAACGAATC TGTCACTCGC 
GGCCAGTTTG CTACGTTTGT CGCCAGAGCA TTGCAGCTTC CGAAAGGATC GGGGAACTTT 
TCCGACGTGT CACCATCTTC CGAACTAGCC GACGGCATTT ACAAAGCAAG CGCGGCAGGG 
ATCGTTCAAG GGTATTCGAA CGGCACGTTT GGCGTGAATA ATAAAATTAC AAGAGAAGAA 
ATGGCAATAA TGATCGACCG AACGCTAGAT TATTTAGGAA TAGAGAAAAA GCAGGCATCG 
CTTGACCATT TTACCGATGT GGATGGGCTC TATTCGGCTT CGAAAATCGC AATCTCTCAT 
AATGTGTATT ATGGCATTAT TCGCGGAATT CCAAACACGG ATGGAACCAC GTTCCGATTT 
GCTCCGAAAG CGTACGCGAC AAGAGCGCAC GCCGCTGCCT TTCTTTACCG CCTGCTTGAA 
GTGTGGGCGG AGCAGACGCC GGAAATGGCG TATCAAATTG CTGAGATTCA AAACGGACAA 
TTAACGCTGC TGCCAAAGCG CTATGCCACA TTTGCACAGG CGGAAGCGTC TGTTACGAAT 
TGGTCTTCTC AAGTGGTGGT GCAAGGCACC AAAATTGTTA AGATGGCTAG CGGAAACGTT 
ATTGCCCAGC CGTCTCCTGG AAAATCAACC ACAATAATCT ATCAATCTAA TTTAAGTACG 
AGTCTTACGT ATGTCGCGCC AAATACAGAA ATGAAATATT TAGATGCCGA TGAAGAAAAA 
GTAAAAGTGC AAATCGCCAA TACGATCGGG TATGTGAAAC AGTCGGAAGT GATGCTAGTG 
CCAACGGCGT TGCTGCAAGG CCGGTCGTAT TACATTGCGC AAAAAGGGGA GTTGTATCAT 
TACATTTACA ATACGACAAG CAACAAATAC GTAAGCTATC TGTACGGCAA AGCGCCGTCG 
TTTATGCAAG ATGGGCAAAA GTATTACAGC TGGGATGGCG AAACGTTTTA TAACACAGCA 
GGCAAGCCCA TCGGCACGGC GTATCAATAC TTTAACGTCC TGCCAATCCG TACGAAAACA 
AATTATACGG CCGAAGAATT GAATCGGTTT GTCGCGGCAA ACCGTTCTGA CAGCCCATTA 
AAAACATTAG GAGAAGCCTT TAAAAAGACG GAAGAAAAAT ATAACGTAAA CGCGCTTTAT 
TTGTTGGCGC ACGCGATTCA TGAAAGCGAT TGGGGAACTA GCGAAATCGC GAAAGAGAAG 
AAAAACTTAT TCGGTATTCG AGCGGTTGAT AGCGATCCAC TCAACAGTGC GGTGAAGTTT 
AACACCTTCG AAGATTGCAT CAATTATATG GCACAGACGA TAGTATCGAA CAGATATGCC 
AATCCAAAGG ACTGGCGGTA TAGTGGAGCG GTTCTTGGTG ATAAGACCAT TGGCTTTAAC 
GTCCGTTATG CGTCTGACCC ATATTGGGGA CAAAAAATCG CTGGAATTAT GTATCGGGCT 
GACAAATTTT TAGGCTGGAA AGACTGGGGC AAATATACGA TTATGGGAAC AACAGTAGAC 
GGCGTGAACG TCCGATTGCA GCCAGCGGCG GTTCCGCCTG TATTCTATGA ATACCGTCTT 
GCAAACACTC CTGTCGTTAA AATCGGGGAA ACAGCGAAAC AGCCGGACGG CTATGTATGG 
TATCAAATTC TTTCCGATTT ACCGACGGAA GAGAATGCTT ATATCCGCAG CGACTTATTA 
AAACCGCTGT CAATCGCAAA ATAA 

 

Protein sequence

MRLLVSLFLV FCLFFANISV SFADDITGIA LEKEMRAMVN QGVVQGYPDG KYRPNESVTR 
GQFATFVARA LQLPKGSGNF SDVSPSSELA DGIYKASAAG IVQGYSNGTF GVNNKITREE 
MAIMIDRTLD YLGIEKKQAS LDHFTDVDGL YSASKIAISH NVYYGIIRGI PNTDGTTFRF 
APKAYATRAH AAAFLYRLLE VWAEQTPEMA YQIAEIQNGQ LTLLPKRYAT FAQAEASVTN 
WSSQVVVQGT KIVKMASGNV IAQPSPGKST TIIYQSNLST SLTYVAPNTE MKYLDADEEK 
VKVQIANTIG YVKQSEVMLV PTALLQGRSY YIAQKGELYH YIYNTTSNKY VSYLYGKAPS 
FMQDGQKYYS WDGETFYNTA GKPIGTAYQY FNVLPIRTKT NYTAEELNRF VAANRSDSPL 
KTLGEAFKKT EEKYNVNALY LLAHAIHESD WGTSEIAKEK KNLFGIRAVD SDPLNSAVKF 
NTFEDCINYM AQTIVSNRYA NPKDWRYSGA VLGDKTIGFN VRYASDPYWG QKIAGIMYRA 
DKFLGWKDWG KYTIMGTTVD GVNVRLQPAA VPPVFYEYRL ANTPVVKIGE TAKQPDGYVW 
YQILSDLPTE ENAYIRSDLL KPLSIAK