| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_3058 |
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| Symbol | |
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| ID | 7979266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | + |
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| Start bp | 3078984 |
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| End bp | 3080165 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644799851 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002950990 |
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| Protein GI | 239828366 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAT GGAAACCATA TATATTCATC GTCATAGTGC TATGTATATG CACAAACTTT
TATGTCCTGT TTAATGAACA TAGTAAAATT CCAAAATCAG TCTATGTGAG CGAACGGACA
AAACCAGAAA AAACAAATAT CAAAGAAACC GTTCGCACTT CTGGCATGAC CGTGCCAACA
GAGCGAAAAT TCGTTTACTA TAATCCGCAG CTCGGTGCCA TTGATGAAAT TCTTGTCACA
AAGGGGCAAG AAGTACAAAT CGGCACACCG CTTATACGCT ATGTGGATGA AGAAGTCGAC
CGGGAGATTC ACCGAATCGC GCGAAAAAAA GAACAATTAA ACGCGCAAAT CAAACAGCTT
TCGAAGGATA TCGATTATTA CAAAACCATG TCCTCTTCTG CCAAAGAAGA CAGTATAGAG
AAGATACAAT GGGAGGAAAA AGCGAGAGAA GCGGAGCACG AAAAAACGCT GCTCGAATGG
CAATTGAAGG AATATGAGGA ACAACAAAAT GAACTAACAG AGAAAAAAGA CGAACTGATC
GTTGAAAGCA ACACGGCTGG CGTGGTAGAA GAAATCAGCT ATGACAAATC CAAACCACTG
ATCACCATCG CTTCCTCTTC CGCTATCGTT CGAGGAAAAG TGAAAGAAGA ATCAATCGGA
AAACTCGCCG TCGGACAGGC AGCAACGATC CAGGTTCCGA ACAAAAATGA GTCACTCGCT
GGCACAATTG CCGATATCGG CAAATTTCCG ATTAAAGAAG CGAACTTTCA AGAAAAAAGT
GAATATCCGT TTACCGTACA ACTAAACGAA CAGCCGAAAC AACTTCCTTT CGGATACCAC
ATAAACATCA CAGTAGTGAC AAAAGAAAAA AACGGCGCGA TCACCGTTCC TACCAAAGCA
GTGTGGCATG AAAAAACGAA ATCATTCGTC TATGTCATCC ATAATGGCAA ACTCGAAAAA
CGGAACGTAA CACTAGGAAT CACACATGGA AAGAAACAAG AAATCAAACA AGGCCTTCGT
GAGAACGAAT ATATCGTGTC CCATCCAACG AAACAGATGA AACACGGAAT GAACGTCATC
GTTCCGCTTG AGATGGAAAA GCCAAGAAAA GAAGCAATCA AGCAACTATC CAAATGGGAC
ATCGCCAAAC ACTTCCTCGA TGGATTTTTC CGTTCTTTCT GA
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| Protein sequence | MKRWKPYIFI VIVLCICTNF YVLFNEHSKI PKSVYVSERT KPEKTNIKET VRTSGMTVPT
ERKFVYYNPQ LGAIDEILVT KGQEVQIGTP LIRYVDEEVD REIHRIARKK EQLNAQIKQL
SKDIDYYKTM SSSAKEDSIE KIQWEEKARE AEHEKTLLEW QLKEYEEQQN ELTEKKDELI
VESNTAGVVE EISYDKSKPL ITIASSSAIV RGKVKEESIG KLAVGQAATI QVPNKNESLA
GTIADIGKFP IKEANFQEKS EYPFTVQLNE QPKQLPFGYH INITVVTKEK NGAITVPTKA
VWHEKTKSFV YVIHNGKLEK RNVTLGITHG KKQEIKQGLR ENEYIVSHPT KQMKHGMNVI
VPLEMEKPRK EAIKQLSKWD IAKHFLDGFF RSF
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