Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_3015 |
Symbol | fliD |
ID | 7979261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 3032169 |
End bp | 3033755 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644799812 |
Product | flagellar capping protein |
Protein accession | YP_002950951 |
Protein GI | 239828327 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCAAGCA ACATGCGCAT TGGCGGTTTG GCGAGCGGCA TGGATATCGA CCAGATCGTT AAGGACTTAA TGAAAGTGGA ACGGATGCCG CTTGATAAGT TGAAACAGAA AAAGCAAATT TTAGAGTGGC AGCGCGATGA TTATCGGGAG ATGAACAAAT TATTACAAGA ACTAGATACG CTTATTTTCG ATGGCATCTA TCGACAAAGC ACTTTTATGA AAAAAACGGT GACCAGCTCG GATGAAAGTG TGGTGACCGC TGTCGCGACA AGCGTGACGG CGAACCAAAA CGTCGAGATT GGGAACATTA CTCAGTTAGC GTCGGCAGCG CGATGGACGT CCACTACGCA GATCACCACA GACAATGGCA ACATCGATCC AAACGCGAAG TTAAATAGCG TAACATTTAC GACAGGCAAC GGAAGTTTTC AATTTTCCGA TCCCATTACT TTAACATTGA ATGTAAAAAA GCCGGGGAGC ACGACGGCGG AAACTGTGGA AATTTCAATT GATCCGCAAA ATGACAGTTT AAATTCCATT ATTATAAAGC TGAATCAAAA TGCGAAGCTA GGAGTCAGTG CATTTTATGA TGAGTTTACC AAAAAAATGG TCATAACGAA AAACGAGACC GGAAGTGGGG CGTCTATTGA AGTCGTATCT GGCGGAGACC TACTTCAGGC GCTTGGTTTT GCGATCGATA GCGTTACCGA TCCTAATACC AATACTACTA CTAATGTGCT TCGGCAAGAT CCCGATTCAG GAAAAAATGC AATATTTACG ATCAATGGGC TGCAGACGGA GCGTACGACG AACACGTTTA TGATTAACGG AATGACGTAT ACGCTAAAAA ACGTAAAGCC AACGGGAACG GTGACGATTT CAACCGCTAC GGATACGGAT TCGATTTTTA ATTCCATCAA AGCATTCGTC GACAAATACA ACGAAGTCAT CGGCAAAATC AACGCCGAGC TGAAAGAAGA ACGCTATCGC AATTATCCGC CGCTTACCGA CGAGCAAAAA GAAGCAATGA CGGAAAAGCA AATTGAGCTT TGGGAAGAAA AAGCTCGGAG CGGGATGTTG CGCGGCGATT CGATTTTATC GAGTGGTCTA AGCAAGATGC GGATGGATCT TTATACGAGT GTGCAAGGAG TTGCGAGCGG GTTTTCCCAG CTTGCGGAAA TTGGCATTAC TACCTCATCT AACTACCTGG ATGGTGGTAA ACTCATTATT GATGAAACGA AACTTCGCCA AAAAATTCAA GAAAATCCGA ATGCGATTTA CCGCTTGTTT AATAATGACA GCACCAACTA TTCAGAAAAA GGCATTGTCC GCCGTCTCCG TGATACAATC AAAGACACCA TCCGCAAAGT CGAACAAAAA GCCGGGAAAA CGCTTTGGAC GAATCAGCAG TTCGCGATTG GCCGTGATTT AATCCAAATC GACAACCAAA TCGATCGGTT TGAAGACCGT CTCAAACAAA TCGAGGATCG CTATTGGCGG CAGTTTACGG CGATGGAAAA GGCGATTCAG CGGGCGAACG AGCAAAGTAT GTATTTAATG AACGCCTTTT TCGGTGGAGC GCAATAA
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Protein sequence | MASNMRIGGL ASGMDIDQIV KDLMKVERMP LDKLKQKKQI LEWQRDDYRE MNKLLQELDT LIFDGIYRQS TFMKKTVTSS DESVVTAVAT SVTANQNVEI GNITQLASAA RWTSTTQITT DNGNIDPNAK LNSVTFTTGN GSFQFSDPIT LTLNVKKPGS TTAETVEISI DPQNDSLNSI IIKLNQNAKL GVSAFYDEFT KKMVITKNET GSGASIEVVS GGDLLQALGF AIDSVTDPNT NTTTNVLRQD PDSGKNAIFT INGLQTERTT NTFMINGMTY TLKNVKPTGT VTISTATDTD SIFNSIKAFV DKYNEVIGKI NAELKEERYR NYPPLTDEQK EAMTEKQIEL WEEKARSGML RGDSILSSGL SKMRMDLYTS VQGVASGFSQ LAEIGITTSS NYLDGGKLII DETKLRQKIQ ENPNAIYRLF NNDSTNYSEK GIVRRLRDTI KDTIRKVEQK AGKTLWTNQQ FAIGRDLIQI DNQIDRFEDR LKQIEDRYWR QFTAMEKAIQ RANEQSMYLM NAFFGGAQ
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