Gene GWCH70_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_2962 
Symbol 
ID7977261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand- 
Start bp2984977 
End bp2985984 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content44% 
IMG OID644799761 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_002950901 
Protein GI239828277 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000177421 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTAA AAATTGGTAT TAACGGTTTT GGCCGTATTG GTCGCAATGT TTTTCGTGCG 
GCATTAAAAA ATCCGAATAT TGAAGTAGTG GCGGTAAATG ACTTAACGGA TGCAAACACA 
TTAGCTCATC TTTTGAAATA TGATTCTGTT CACGGAAAAT TAGACGCGGA AGTATCAGTG 
AATGGCAATA ATATCGTTGT AAACGGAAAA GAAATCGTTG TAAAAGCGGA ACGCGATCCA 
GCTCAACTAG CATGGAACGA ATTAGGTGTG GACATTGTCG TTGAATCGAC AGGTCGCTTC 
ACGAAACGTG AAGACGCGGC AAAACATTTA GAGGCTGGCG CGAAAAAAGT AATCATTTCC 
GCACCGGCGA AAGACGAAGA TATTACGATC GTGATGGGTG TAAACCAAGA CAAATACGAT 
CCTGCAAACC ATCACATTAT TTCCAACGCT TCTTGTACAA CGAACTGCTT AGCGCCATTT 
GCAAAAGTGC TTCATGAAAA ATTCGGTATT GTTCGCGGAA TGATGACAAC AGTTCACGCT 
TATACGAACG ACCAACAAAT TTTAGACTTG CCTCATAAAG ATTTGCGCCG TGCGCGTGCT 
GCAGCAGAAT CGATTATTCC GACAACAACA GGTGCAGCAA AAGCAGTTGC CCTTGTACTT 
CCTGAACTAA AAGGCAAACT AAACGGTATG GCAATGCGTG TACCAACACC AAACGTGTCT 
GTTGTCGACC TTGTTGCGGA GCTTGAAAAA GAAGTAACAG TAGAAGAAGT CAACGCAGCA 
TTGAAAGAAG CGGCGGAAGG CGAATTAAAA GGCATCTTAG CTTACAGTGA AGAGCCGCTT 
GTATCCCGCG ACTATAATGG CAGCACGGCA TCTTCGACCA TCGACGCGCT TTCCACAATG 
GTCTTGGAAG GAAAAATGGT AAAAGTCGTT TCTTGGTACG ATAACGAAAC AGGCTACTCT 
CATCGTGTTG TCGACCTTGC AGCATATATT GCATCCAAAG GACTATAA
 
Protein sequence
MAVKIGINGF GRIGRNVFRA ALKNPNIEVV AVNDLTDANT LAHLLKYDSV HGKLDAEVSV 
NGNNIVVNGK EIVVKAERDP AQLAWNELGV DIVVESTGRF TKREDAAKHL EAGAKKVIIS 
APAKDEDITI VMGVNQDKYD PANHHIISNA SCTTNCLAPF AKVLHEKFGI VRGMMTTVHA 
YTNDQQILDL PHKDLRRARA AAESIIPTTT GAAKAVALVL PELKGKLNGM AMRVPTPNVS 
VVDLVAELEK EVTVEEVNAA LKEAAEGELK GILAYSEEPL VSRDYNGSTA SSTIDALSTM 
VLEGKMVKVV SWYDNETGYS HRVVDLAAYI ASKGL