| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2850 |
|---|
| Symbol | |
|---|
| ID | 7978078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 2885766 |
|---|
| End bp | 2886701 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644799657 |
|---|
| Product | nuclease (SNase domain protein) |
|---|
| Protein accession | YP_002950797 |
|---|
| Protein GI | 239828173 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAT TAGCAAATTT GCTGGCAGCA GCTTTATTCA TTCTCTTTTT TCCAACCAGC
AGCTTCGCCC ATCCAGGAAC TCTTGACGAA CTAGGCGGAC ATTTCCGCAA TTCAGACTGC
GTATACTTGC TGCATGAACC GACAGCGCTT GCCATGCAGG CCAAAAATAA AGCAGAGCTT
GTCCAATTAG TCAAAAAATA CAATAGCAAC GCCAAGTGCA CCCGACAGCT GACGGTGGAT
AAAATTGACC TAGAAGGGCA TACGCTGGGC GGAGTCCCTG CAACGAAATC AAGTTCATCG
GCCACATTGC GATTAGGAAA AAAATATCCT GCAACATTAG TAGAGTGCAT TGATGGAGAT
ACAGCAAAGT TTATCGTCAA TGGCCGCGAA TATACAACCC GCTTTCTATT CATCGATACG
CCGGAAAGTA CAATCGAAGT CGAGCCGTAT GGAAAGGAAG CAAGCCGATT TACTTGTTCC
CTCTTAAAAC AAGGAAACAT CACATTGGAA ACTGACGGCA GCACGCTGTT TGATAAGTAT
CATCGCTTGC TCGCTTGGGT GTGGGTAGGA GACAAATTGC TTCAGGAAGA AGTGACCAAA
GCAGGACTGG TCGAAGACTT TTACGATTAC GGGGATTATA AATACGAAGG TCGAATCCGC
GACGCCATGG CGGAGGCGAA ACGAAACGGC GCGGGAATGT ATGGCCGTTC ATCCGCGCAA
AAACCTGATT CCTCCCGTCA GCAGCAAACA GCGGAAGAAA AAACGGAAAG CAAAAAAACA
ACACCCGCAC CAAACTCACC GGCACAAGAA AATGAAGCGC AGCACGATGA CCAGCAAAAA
CAGCACGATG CAGAGTCCGA CAAAACAAAT TCATTCCTTT ACTTGCTCAT TGGCGCAGTT
GCGATTATCA TTATTTACGC TTTCGCCCGC AAATAA
|
|---|
| Protein sequence | MRKLANLLAA ALFILFFPTS SFAHPGTLDE LGGHFRNSDC VYLLHEPTAL AMQAKNKAEL
VQLVKKYNSN AKCTRQLTVD KIDLEGHTLG GVPATKSSSS ATLRLGKKYP ATLVECIDGD
TAKFIVNGRE YTTRFLFIDT PESTIEVEPY GKEASRFTCS LLKQGNITLE TDGSTLFDKY
HRLLAWVWVG DKLLQEEVTK AGLVEDFYDY GDYKYEGRIR DAMAEAKRNG AGMYGRSSAQ
KPDSSRQQQT AEEKTESKKT TPAPNSPAQE NEAQHDDQQK QHDAESDKTN SFLYLLIGAV
AIIIIYAFAR K
|
|---|
| |