| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2825 |
|---|
| Symbol | |
|---|
| ID | 7978041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 2856376 |
|---|
| End bp | 2857185 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644799615 |
|---|
| Product | integrase domain protein SAM domain protein |
|---|
| Protein accession | YP_002950774 |
|---|
| Protein GI | 239828150 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TAGAAAATGA GAGAAAATTG CAGAGAAAGA GCAAGAGAGG AAGAAGAGGA
GAGCTGAGTC GTGAAGAGTT GTTGTTAATA TCTGACGACA TTGGAGAAAT TGAATACACA
TTTGAGGAAT TGTTAGAGAT ATTTATTGAG GATTGCGAAT TGAGGAATTT AAGGGAACAT
ACGATTAAAT ATTATCGCAG CGAGTTAAAC GCATTTATAA AATTGCTGAA AGAGCAAGAA
ATCGAATTAC GTGTAAGTGA ATGGACAGGA GAAACCATTA AGCGAAATGT CATTATGTAC
ATGAGAGAAA AAGGTCTTAA GACAGTCAGT ATCAATTCCC GTTTGCGAGC CATGAGGGCG
TTTTTTAACT TTTTGGAAGG ACGAAATCTC ATAAAAAGCA ATCCGATGAA AGACATCAAA
TTGCTGAAGG ATAGAAAAAG GATTGTAGAA ACATTTGATA ACCAGCAGAT AAAGGCGTTA
TTTAAAGCGT GCGACCTTCG CACGTTTGTA GGTTTAAGGG ATTATACGAT TATGATGTTG
CTGTTAGAAA CGGGAGTTCG AGTAAATGAA CTGGTGGGTA TAAAAACAAC AGATATCATT
TGGGAGCAAA AAGTCATCCG CATTCGAAAC ACAAAAGGTC GCTTCGAACG TTTTGTTCCT
ATTCAAGATA CACTGTTGTA TTGTCACTAC GATAGTGAAC CATATTTAGG TAAATCCAGC
TATAAAAATG ACGTACAAAC TGACATCAGT TTCAGTTTTG GTACGTCATT TATTACTTTT
ACTGTAGATG AGCATTTTTC ATTACAATAA
|
|---|
| Protein sequence | MKKIENERKL QRKSKRGRRG ELSREELLLI SDDIGEIEYT FEELLEIFIE DCELRNLREH
TIKYYRSELN AFIKLLKEQE IELRVSEWTG ETIKRNVIMY MREKGLKTVS INSRLRAMRA
FFNFLEGRNL IKSNPMKDIK LLKDRKRIVE TFDNQQIKAL FKACDLRTFV GLRDYTIMML
LLETGVRVNE LVGIKTTDII WEQKVIRIRN TKGRFERFVP IQDTLLYCHY DSEPYLGKSS
YKNDVQTDIS FSFGTSFITF TVDEHFSLQ
|
|---|
| |