Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_2808 |
Symbol | |
ID | 7978026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 2841728 |
End bp | 2842213 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644799601 |
Product | hypothetical protein |
Protein accession | YP_002950760 |
Protein GI | 239828136 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TGATTCCTTT TGCTGTTGCG GCATCCCTTG CCATCGCAAC ATTGCCTGCT TCTGCTTTTG CGATTGAATC CAATGATCCT GAGCTCCAAA GCTATCTAAA CGAGATCGGT ATGACCCAGG AAGAGCTGAA AGAATATTTA GACTACGATG GCTACACATT AGAAGATTTT CAAGATGTCG ATGAGCTTCG CAGCGAGCTT GGCGATGTAT TGACAGAAGA AAATTTACAA CAATTGCTTG AAGATTATGG CTTAACGAAA GAGGAATTAA AACAACTTCT TATCGATAAA ACGGTCGCTG GAGAGTTTAC CTACAAAGTC CGTAAAGTGC GAATTGTAGA CGCCGATGAC AGAACCGTGA TTGTGCCAAA ATCAAAAGCC ACATTAACCG TATCTACGTG CTATCCATTC AACTACATCG GCGCAGCACC GAAGCGGTAT ATCCTTGTCG CTAACTTAGT GGAGGCAAGG AATTGA
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Protein sequence | MKKLIPFAVA ASLAIATLPA SAFAIESNDP ELQSYLNEIG MTQEELKEYL DYDGYTLEDF QDVDELRSEL GDVLTEENLQ QLLEDYGLTK EELKQLLIDK TVAGEFTYKV RKVRIVDADD RTVIVPKSKA TLTVSTCYPF NYIGAAPKRY ILVANLVEAR N
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