| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2776 |
|---|
| Symbol | |
|---|
| ID | 7977998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 2811170 |
|---|
| End bp | 2813068 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644799571 |
|---|
| Product | asparagine synthase (glutamine-hydrolyzing) |
|---|
| Protein accession | YP_002950730 |
|---|
| Protein GI | 239828106 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000288023 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGGT TTATCGGATG CGTTCATGAT GAGCCGAAAA TGCCAGACGA ACAATGGCAG
AAAACGTTCG AAGAGATGAA TGATATGATT ACACATCGTG GTCCGGACGA TCATGGATAC
TATTTTGATG AATATGTCCA TTTCGGGTTC CGCCGCTTAA GCATCATTGA TTTAGAAGCA
GGTCATCAGC CGCTTTCTTA CGAAAATGAG CGGTATTGGA TTATTTTTAA TGGCGAAATT
TACAATTACC TTGAGCTGCG GGATGAATTA GTGGAAAAAG GATATGAATT TGCAACCAAC
TCGGATACGG AAGTCATTAT CGCTCTTTAC AGCGCTGAAA AAGAAAAAGC GGTAGAAAAG
CTTCGCGGCA TGTTTGCGTT TGTCATTTGG GATAAAGAAG AAAAAACGAT TTTTGCCGCG
CGCGACCCAT TCGGCATTAA GCCGTTTTTC TACTTAGAAG AAGCGGGTCG TACGTTTTTT
GCATCGGAAA AGAAAAGCAT TTTGCATGCG ATGGAAAACG ACGTTCTTGA TTATAATGCA
CTGCAGCACT ATTTAACATT CCAATATGTG CCTGAGCCAA TGACCATGTC CGCTGGGATT
AAAAAATTGG AGCCGGGCCA CTATATCAAA AAGAAAGTCG GTGAAAAATT AACGGTACAC
CGCTATTGGA AAGCGCGGTT CCAGCCTGTA TGGAAATCGG AAGACGAATT TGTGAAAGAA
ATTCGCGATG TTTTATTCGA TTCTGTACGC GTACATATGC GCAGTGATGT GCCGGTTGGT
TCATTTTTAT CGGGCGGAAT CGATTCTTCG CTGATTGCTT CGATTGCGAA GCAGTTTCAT
CCGAACATCA AAACTTTTTC GGTTGGTTTT GAATGGGAAG GGTTTAGCGA AATTACTGTT
GCGGAAGAAA CAGCGGAAAA ATTAGGTGTC GAAAACATTA GCTACGTCAT TTCACCAGAA
GAGTACATGG AAGAATTGCC GAAAATTATG TGGCATATGG ATGATCCGCT TGCCGATCCA
GCAGCTGTTC CGCTTTATTT CGTCGCCCGT GAAGCGAGAA AGCATGTAAC GGTTGTTCTT
TCTGGAGAGG GAGCAGATGA GTTATTTGGA GGGTACAATA TTTATTGCGA ACCACAGTCA
TTAAAAGTGT TTGAACAGAT CCCTAACCCG GTAAAATCCG CATTGCGCGT CATTGCTCAT
ATGCTTCCAG AAGGTGTCAA AGGAAAAAGC TTTATCGAAC GCGGATTAAC TCCGATGGAA
GAACGTTACA TTGGAAATGC GAAAATGTAT AGTGAAGAAG AAAAGCAAGG TTTGTTGAAA
TCTTACAAAC ATGGGTTGGA ATATACGAAG ATTACTCGTC CGTTTTATGA AGAGACAACC
CATTATCCAC CGATGAATCG GATGCAATAT ATTGATATTC ACACATGGTT GCGCGGAGAT
ATTTTGTTAA AGGCCGACAA AATGACGATG GCCCATTCGT TGGAATTGCG CGTCCCATTT
TTAGACAAGG CCGTCTTTGA AGTGGCGGCA AAAATTCCGC CGGAAATGAA AACGGCTAAT
AATACGACGA AATACATTTT GCGCAAAGCG GCAGAAGGCA TTGTTCCCGA TCATGTTCTT
CACCGCAAAA AGCTTGGCTT CCCAGTGCCG ATTCGCCATT GGCTTAAAAA TGAAATGCAT
GATTGGGCAA TAACAATCAT CAAGGAAAGT GAAACCGATC ATTTATTCCA TAAAGATGTG
TTATATCGCT TGTTAGAAGA GCATTGTGCC AATAAAGCGG ATCATAGCCG CAAAATTTGG
ACGGTGCTAG TATTTATGAT TTGGCATCAA GTATATATTG AAAGAAAGTA CGATTTTTCC
CATCTATATA AAAAAGACAG ACAACCCCTA TCCATCTAA
|
|---|
| Protein sequence | MCGFIGCVHD EPKMPDEQWQ KTFEEMNDMI THRGPDDHGY YFDEYVHFGF RRLSIIDLEA
GHQPLSYENE RYWIIFNGEI YNYLELRDEL VEKGYEFATN SDTEVIIALY SAEKEKAVEK
LRGMFAFVIW DKEEKTIFAA RDPFGIKPFF YLEEAGRTFF ASEKKSILHA MENDVLDYNA
LQHYLTFQYV PEPMTMSAGI KKLEPGHYIK KKVGEKLTVH RYWKARFQPV WKSEDEFVKE
IRDVLFDSVR VHMRSDVPVG SFLSGGIDSS LIASIAKQFH PNIKTFSVGF EWEGFSEITV
AEETAEKLGV ENISYVISPE EYMEELPKIM WHMDDPLADP AAVPLYFVAR EARKHVTVVL
SGEGADELFG GYNIYCEPQS LKVFEQIPNP VKSALRVIAH MLPEGVKGKS FIERGLTPME
ERYIGNAKMY SEEEKQGLLK SYKHGLEYTK ITRPFYEETT HYPPMNRMQY IDIHTWLRGD
ILLKADKMTM AHSLELRVPF LDKAVFEVAA KIPPEMKTAN NTTKYILRKA AEGIVPDHVL
HRKKLGFPVP IRHWLKNEMH DWAITIIKES ETDHLFHKDV LYRLLEEHCA NKADHSRKIW
TVLVFMIWHQ VYIERKYDFS HLYKKDRQPL SI
|
|---|
| |