Gene GWCH70_2724 details

Gene Information

• Locus tag: GWCH70_2724
• Symbol: rpsD
• ID: 7979145
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. WCH70
• Kingdom: Bacteria
• Replicon accession: NC_012793
• Strand: +
• Start bp: 2758743
• End bp: 2759345
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 644799522
• Product: 30S ribosomal protein S4
• Protein accession: YP_002950681
• Protein GI: 239828057
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000000198678
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCGTT ATACAGGTCC AACGTGGAAA ATTTCTCGCC GCCTAGGAAT CTCCTTAAGC 
GGTACAGGTA AAGAGTTGCA AAAACGTCCT TACCCACCAG GTCAACATGG TCCAAGTCAA 
CGCAGAAAAC TTTCGGAATA TGGTCTGCAA TTGCAAGAAA AACAAAAACT TCGCCATATG 
TACGGCGTAA ACGAACGTCA ATTCCGCAAA ACGTTTGAAG AAGCTGGCAA AATGCCTGGT 
AAACACGGGG AAAACTTTAT GATTCTTTTA GAATCACGTT TAGACAACCT TGTTTACCGT 
TTAGGCTTTG CGCGTACTCG CCGCCAAGCT CGTCAGCTTG TAACGCACGG CCATATTTTA 
GTTGACGGAA ACCGTGTAAA CATTCCATCT TATCGCGTGA AACCTGGCCA AACGATTTCT 
GTCCGCGAAA AATCTCGCAA CCTTCAAGTC ATTAAAGAAG CATTAGAATT GAACAACTTC 
GTACCAGATT ATTTAACATT GGATGCTGAA AAACTTGAAG GCACATATAC TCGTTTACCT 
GAACGCTCCG AATTGCCATC AGAAATTAAC GAAGCATTAA TCGTTGAGTT CTACTCTCGT 
TAA 

 

Protein sequence

MARYTGPTWK ISRRLGISLS GTGKELQKRP YPPGQHGPSQ RRKLSEYGLQ LQEKQKLRHM 
YGVNERQFRK TFEEAGKMPG KHGENFMILL ESRLDNLVYR LGFARTRRQA RQLVTHGHIL 
VDGNRVNIPS YRVKPGQTIS VREKSRNLQV IKEALELNNF VPDYLTLDAE KLEGTYTRLP 
ERSELPSEIN EALIVEFYSR