| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2716 |
|---|
| Symbol | |
|---|
| ID | 7976534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 2748691 |
|---|
| End bp | 2750283 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644799514 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_002950673 |
|---|
| Protein GI | 239828049 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGGG AAAATTTCAT TGCGCCGGAA CGCTATAATT TAACGTCTGA GATCGAAAAA
CATGCGATGG CTAATCCGAA TAAGCTTGCT TTAAAATGGG AAAATGAACA AGGGGAAACA
CGGGAGATTA CATATGGCGA TTTAATCAAA CACGCCAATC AAATTGGAAA CGCTTTATTA
AAACGTGGGC TTGAAAAAGG GGATAAAGTG CTTGTTATGG TGCCCCGCTT AATTGAAGCG
TATGAAGTAT ATTTAGGAAC ATTAAAAGCG GGGCTGGTAG TCATTCCGAG TTCGGAAATG
CTCCGCACAA AAGATCTGCA ATACCGTATT TCCCATGGTG AGGTAAAAGC GATTATTGCG
TATGAGCCAT ATGTGGATCA ATTTGAACCG ATCGGAAACA TTGACTATAT TATGAAATTC
GTTGTCGGAA AGACGAAACC GAGCGGTTGG ATCAATTTAG AGGAAGCGAT GAAGGCAGAA
AGCGATGAGC TTGTTGCTGC TGACACATCC CGTGATGATA TGGCGTTTTT ATCTTATACA
TCGGGAACGA CCGGAAATCC GAAAGGGGTC GTTCATTCGC ACGGGTGGGG GTATGCGCAT
TTGCGCATCG CTGCGAAAAA TTGGTTATGC ATCGAAGAAA ATGATCTTGT CTGGGCGACT
GCCGGTCCAG GATGGCAAAA ATGGATTTGG AGCCCGTTTT TATCAACGCT CGGTTCAGGC
GCCACTGGGT TTGTGTATTA TGGCCGGTTT GATCCAGAAA AATATTTACA GCTTTTAAGC
AAGTACGAAG TAAATGTGCT TTGCTGCACG CCGACGGAGT ATCGGCTAAT GGCAAAAGTG
CCAAATATCG GCGATTATAA GCTTCCGCAT CTCCGCAGCG CCGTATCAGC CGGAGAGCCG
CTTAACAGGG AAGTGATTGA TACGTTTGAA AAATATTTCA ACATTCAAGT CCGGGATGGA
TATGGACAAA CGGAAAATAC ATTGCTTGTC GGCGTTATGA AAGGTATGAA GATCAAACCA
GGATCCATGG GCAAACCGAC GCCGGGAAAC ATCGTTGAGA TTATCAATGA AAACGGGGAA
CCTTGCGCCG TCGGCGAAGT TGGCGATATC GCCGTCCACG TCGACACTCC AACGCTGTTT
AAGTATTACT ATAAAGATCC GGAAAGAACG GCGATGCAAT TCCGCGGTGA TTATTATATT
ACAGGGGATA AAGCGAGAAA AGATGAAGAT GGGTATTTTT GGTTTGAAGG GCGTGGAGAT
GATATTATCA TTAGCTCCGG TTATACAATC GGACCGTTTG AAGTAGAAGA CGCCCTTGTC
AAGCACCCTG CGGTAAAAGA GTGTGCTGTC GTCGCTAGTC CAGATGAAAT ACGCGGTTAT
GTTGTGAAAG CGTTTGTTGT TCTTCGCGAA GGAGTAGATA AAAATGATCC GGCGCTGATT
CCAAAGCTGC AGGAGCATGT CAAGCAGCTG ACCGCACCGT ATAAATACCC GCGTAAAATT
GAATTTGTCG ATGATTTGCC GAAAACGCCG TCAGGAAAAA TCCGTCGCGT GGAGCTGCGC
GAACGCGAGA TGCGCCTTGC AAAGCAGCAA TAA
|
|---|
| Protein sequence | MKRENFIAPE RYNLTSEIEK HAMANPNKLA LKWENEQGET REITYGDLIK HANQIGNALL
KRGLEKGDKV LVMVPRLIEA YEVYLGTLKA GLVVIPSSEM LRTKDLQYRI SHGEVKAIIA
YEPYVDQFEP IGNIDYIMKF VVGKTKPSGW INLEEAMKAE SDELVAADTS RDDMAFLSYT
SGTTGNPKGV VHSHGWGYAH LRIAAKNWLC IEENDLVWAT AGPGWQKWIW SPFLSTLGSG
ATGFVYYGRF DPEKYLQLLS KYEVNVLCCT PTEYRLMAKV PNIGDYKLPH LRSAVSAGEP
LNREVIDTFE KYFNIQVRDG YGQTENTLLV GVMKGMKIKP GSMGKPTPGN IVEIINENGE
PCAVGEVGDI AVHVDTPTLF KYYYKDPERT AMQFRGDYYI TGDKARKDED GYFWFEGRGD
DIIISSGYTI GPFEVEDALV KHPAVKECAV VASPDEIRGY VVKAFVVLRE GVDKNDPALI
PKLQEHVKQL TAPYKYPRKI EFVDDLPKTP SGKIRRVELR EREMRLAKQQ
|
|---|
| |