Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_2678 |
Symbol | |
ID | 7976500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 2709578 |
End bp | 2710852 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644799478 |
Product | isocitrate dehydrogenase |
Protein accession | YP_002950637 |
Protein GI | 239828013 |
COG category | [C] Energy production and conversion |
COG ID | [COG0538] Isocitrate dehydrogenases |
TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGCGC AAGGTGAAAA AATTACTGTA ACAAATGGTG TGTTAAATGT ACCAAACAAT CCAATTATTC CATTTATTGA AGGGGATGGG ACAGGTCCAG ACATTTGGGC TGCCGCATCT CGTGTGTTGG AAGCAGCAGT AGAAAAGGCG TATAAAGGGG AAAAGAAAAT CGTTTGGAAA GAAGTTCTCG CAGGGGAAAA AGCGTACAAA CAAACCGGTG AGTGGCTTCC ACAAGAAACC ATTGATGTTA TTCGGGAATA CATAATCGCG ATTAAAGGAC CGTTGACGAC TCCAGTCGGC GGGGGAATTC GTTCATTGAA CGTAGCGCTT CGCCAAGAGT TGGATTTATT CGTTTGCTTG CGTCCGGTCC GCTATTTTAA AGGTGTTCCT TCTCCGGTAA AACGTCCAGA AGATACAGAT ATGGTCATTT TCCGTGAAAA CACGGAAGAT ATTTATGCTG GAATTGAGTA TGCCAAAGGG ACACCAGAAG TGAAAAAAGT GATTGATTTC TTGCAAAATG AAATGGGCGT TCGCAAAATC CGCTTCCCAG AAACTTCTGG TATCGGCATT AAGCCAATTT CCGAACAAGG AACGAAACGG TTAGTGCGCG CTGCAATCAA CTATGCGATT GAACACGGAC GAAAATCGGT TACGCTTGTT CATAAAGGAA ATATTATGAA ATTTACGGAA GGCGCGTTTA AAAATTGGGG CTATGAATTA GCAGAAGAAG AATTCAGCGA CAAAGTATTT ACGTGGGCGC AATATGACCG CATTGTCGAA ACAGAAGGAA AAGAAGCAGC GAACAAGGCG CTGGCGGAAG CAGAAGAAGC CGGAAAAATT ATTATCAAAG ACGTCATTGC CGATATTTTC TTACAACAAA TTTTAACGCG TCCGCGCGAA TTTGATGTGG TTGCAACGAT GAACTTAAAC GGCGACTATA TTTCTGACGC GTTAGCAGCA CAAGTTGGCG GCATTGGTAT CGCTCCGGGA GCAAACATTA ACTACGAAAC AGGGCATGCC ATTTTTGAAG CTACTCACGG AACGGCTCCG AAATATGCAG GATTGGATAA AGTGAACCCA TCATCGGTCA TTTTATCTGG TGTGATGATG TTTGAGCATC TCGGCTGGAA CGAAGCGGCA AAACTCATTG TCAAAGCAAT GGAAAAAACG ATTGCTGCAA AAATCGTTAC ATACGATTTT GCTCGTCTCA TGGAGGGCGC TACGGAAGTA AAATGTTCAG AATTCGCTGA CGCACTCATC CGGAATATGG AATAA
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Protein sequence | MVAQGEKITV TNGVLNVPNN PIIPFIEGDG TGPDIWAAAS RVLEAAVEKA YKGEKKIVWK EVLAGEKAYK QTGEWLPQET IDVIREYIIA IKGPLTTPVG GGIRSLNVAL RQELDLFVCL RPVRYFKGVP SPVKRPEDTD MVIFRENTED IYAGIEYAKG TPEVKKVIDF LQNEMGVRKI RFPETSGIGI KPISEQGTKR LVRAAINYAI EHGRKSVTLV HKGNIMKFTE GAFKNWGYEL AEEEFSDKVF TWAQYDRIVE TEGKEAANKA LAEAEEAGKI IIKDVIADIF LQQILTRPRE FDVVATMNLN GDYISDALAA QVGGIGIAPG ANINYETGHA IFEATHGTAP KYAGLDKVNP SSVILSGVMM FEHLGWNEAA KLIVKAMEKT IAAKIVTYDF ARLMEGATEV KCSEFADALI RNME
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