Gene GWCH70_2606 details

Gene Information

• Locus tag: GWCH70_2606
• Symbol: sdhA
• ID: 7978271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. WCH70
• Kingdom: Bacteria
• Replicon accession: NC_012793
• Strand: -
• Start bp: 2639266
• End bp: 2641023
• Gene Length: 1758 bp
• Protein Length: 585 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 644799407
• Product: succinate dehydrogenase flavoprotein subunit
• Protein accession: YP_002950566
• Protein GI: 239827942
• COG category: [C] Energy production and conversion
• COG ID: [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
• TIGRFAM ID: [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0000856903
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAG GAAAAATCAT CGTAGTTGGT GGCGGTCTAG CTGGTCTAAT GGCAACGATT 
AAAATCGCGG AAGCAGGCGT ACCTGTAGAA TTGTTCTCGC TCGTACCTGT TAAGCGGTCT 
CACTCTGTCT GTGCACAAGG TGGGATTAAC GGTGCGGTAA ATACGAAAGG GGAAGGCGAT 
TCTCCTTGGG AACATTTCGA CGATACCGTA TATGGCGGTG ACTTTTTAGC GAACCAGCCT 
CCGGTAAAAG CGATGTGTGA GGCAGCGCCA AGCATCATTT ATATGCTTGA CCGCATGGGA 
GTCATGTTCA ACCGTACTCC TGAAGGGTTG CTTGATTTCC GCCGCTTCGG TGGAACGCAG 
CATCACCGTA CTGCATACGC AGGGGCAACG ACAGGCCAGC AGATATTATA TGCGCTTGAT 
GAACAAGTGC GCCGCCATGA AGTGGCTGGA CTTGTCACAA AATATGAAGG ATGGGAGTTT 
TTAGGCGTTG TTTTAGATGA TGAACAAATT TGCCGAGGAA TCGTTGCGCA AGATTTAAAA 
ACAATGGAAA TTAAAGCGTT TCCTGCGGAC GCGGTCATTA TGGCGACAGG CGGACCAGGA 
GTCATTTTTG GAAAATCGAC GAACTCGATC ATCAACACAG GTTCAGCAGC GTCTATCGTC 
TATCAACAAG GCGCGTACTA TGCAAACGGG GAATTTATCC AAATTCACCC GACGGCGATT 
CCGGGAGACG ATAAACTGCG TCTCATGAGT GAGTCAGCCC GAGGGGAAGG CGGAAGAGTC 
TGGACATATA AAGACGGAAA ACCGTGGTAT TTCCTTGAAG AAAAATATCC GGCTTACGGA 
AACCTTGTTC CTCGTGATAT CGCGGCTCGT GAAATTTTCC ACGTTTGCGT TGATTTGAAG 
CTCGGCATCA ACGGCGAAAA CATGGTATAT CTTGATCTTT CTCATAAAGA TCCGAAAGAA 
CTAGATATCA AACTTGGCGG TATTATTGAA ATTTACGAGA AATTTATGGG TGAAGACCCT 
CGCAAAGTGC CGATGAAAGT ATTCCCAGCT GTTCACTATT CGATGGGCGG CTTATGGGTT 
GATTATGATC AAATGACAAA CATTAAAGGA TTGTTTGCCG CTGGCGAATG TGATTACTCG 
ATCCATGGCG CAAACCGTCT AGGAGCTAAC TCCTTATTAT CAGCGATTTA CGGCGGCATG 
GTTGCTGGAC CAAATGCGGT TAGATACATT CGCGGTTTGG AAAAATCGGC AGACGCAATG 
CCATCATCGT TGTACGACCG CTATGTGAAG CAAGAAGAAG AGCGTTGGAA CAACATCTTG 
TCCATGGATG GAACAGAAAA CGCGTATGTG CTTCATAAAG AGTTGGGCGA ATGGATGACA 
GCGAACGTTA CAATCGTTCG TTACAACGAT AAGTTGTTGA AAACAGACGA GAAAATCCAG 
GAATTGTTGG AACGCTATAA AAACATCAGT GTTACAGACA CGTCGAAATG GAGCAACCAA 
GGCGCAACAT TTATTCGTCA GTTATATAAT ATGCTTCAAC TAGCGCGGGT AATTACGCTA 
GGCGCTTACA ACCGCAACGA AAGCCGTGGT GCACACTATA AACCGGAGTT TCCAGAGCGC 
AATGACGAAG AGTGGCTCAA AACAACGATG GCACGCTATA CCCCAGATGG ACCGGCATTC 
CACTACGAAG ATGTCGATGT ATCGTTGATT AAGCCACGCA AACGCGACTA CACGAAAAAG 
AAAGAGGAAG TGAAATAA 

 

Protein sequence

MKKGKIIVVG GGLAGLMATI KIAEAGVPVE LFSLVPVKRS HSVCAQGGIN GAVNTKGEGD 
SPWEHFDDTV YGGDFLANQP PVKAMCEAAP SIIYMLDRMG VMFNRTPEGL LDFRRFGGTQ 
HHRTAYAGAT TGQQILYALD EQVRRHEVAG LVTKYEGWEF LGVVLDDEQI CRGIVAQDLK 
TMEIKAFPAD AVIMATGGPG VIFGKSTNSI INTGSAASIV YQQGAYYANG EFIQIHPTAI 
PGDDKLRLMS ESARGEGGRV WTYKDGKPWY FLEEKYPAYG NLVPRDIAAR EIFHVCVDLK 
LGINGENMVY LDLSHKDPKE LDIKLGGIIE IYEKFMGEDP RKVPMKVFPA VHYSMGGLWV 
DYDQMTNIKG LFAAGECDYS IHGANRLGAN SLLSAIYGGM VAGPNAVRYI RGLEKSADAM 
PSSLYDRYVK QEEERWNNIL SMDGTENAYV LHKELGEWMT ANVTIVRYND KLLKTDEKIQ 
ELLERYKNIS VTDTSKWSNQ GATFIRQLYN MLQLARVITL GAYNRNESRG AHYKPEFPER 
NDEEWLKTTM ARYTPDGPAF HYEDVDVSLI KPRKRDYTKK KEEVK