| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2600 |
|---|
| Symbol | rph |
|---|
| ID | 7978265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 2634435 |
|---|
| End bp | 2635202 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644799402 |
|---|
| Product | ribonuclease PH |
|---|
| Protein accession | YP_002950561 |
|---|
| Protein GI | 239827937 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0689] RNase PH |
|---|
| TIGRFAM ID | [TIGR01966] ribonuclease PH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATAG ATGGCAGAGA AAACAAACAG CTGCGTCCTG TACATATGGA GAAACATTTT
ATTAAACATG CAGAAGGGTC GGTATTCATT ACAGTTGGTG ATACGAAAGT GATTTGCACA
GCAAGCATCG ATGACAAAGT GCCGCCGTTT ATGCGTGGCG GCGGAAAAGG ATGGATTACT
GCGGAATATG CGATGCTGCC GAGAGCGACA GAACAGCGAA ATGTGAGGGA ATCTAGCAAA
GGAAAATTAT CAGGGCGAAC AATGGAAATC CAACGTCTTA TCGGAAGAGC GCTTCGTTCT
GTCGTTAATT TGGACAAGTT AGGCGAGAAG ACGGTATGGA TTGATTGTGA TGTGATTCAA
GCGGACGGAG GAACGCGGAC AGCGTCGATT ACAGGAGCGT ATGTAGCGAT GGTGTTAGCA
TTCGCGAAAT TGATGGAAGA AAAGAAACTC GATGAACTTC CTGTGAATGA TTTTCTAGCT
GCTACATCTG TTGGGATCGA TCCAGAACAC GGAATTATTC TTGATTTAAA CTATGCGGAA
GACGCGCGGG CAGAAGTCGA TATGAACATT GTGATGACAG GAGCTGGCCG CTTTGTGGAA
ATTCAAGGAA CAGGAGAAGA AGCGACATTT TCGCGAGAAC AATTAAATGA ATTGCTAGAT
ACAGCAGAAG TAGGAATTCG ACAGCTTATC GACATTCAAC GGAAAACGTT AGGAGAACTT
GCAATGCAAA TTGATATAAA GAGAAGCGAG GAAAGTGGGG ATACATGA
|
|---|
| Protein sequence | MRIDGRENKQ LRPVHMEKHF IKHAEGSVFI TVGDTKVICT ASIDDKVPPF MRGGGKGWIT
AEYAMLPRAT EQRNVRESSK GKLSGRTMEI QRLIGRALRS VVNLDKLGEK TVWIDCDVIQ
ADGGTRTASI TGAYVAMVLA FAKLMEEKKL DELPVNDFLA ATSVGIDPEH GIILDLNYAE
DARAEVDMNI VMTGAGRFVE IQGTGEEATF SREQLNELLD TAEVGIRQLI DIQRKTLGEL
AMQIDIKRSE ESGDT
|
|---|
| |