Gene GWCH70_2398 details

Gene Information

• Locus tag: GWCH70_2398
• Symbol: ispG
• ID: 7975987
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. WCH70
• Kingdom: Bacteria
• Replicon accession: NC_012793
• Strand: +
• Start bp: 2436892
• End bp: 2437983
• Gene Length: 1092 bp
• Protein Length: 363 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 644799201
• Product: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
• Protein accession: YP_002950361
• Protein GI: 239827737
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
• TIGRFAM ID: [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGTGAAA TTATTCATCG TTCAAAAACT CGTCCTGTTC GCGTTGGCAA TTTAACGATT 
GGCGGAAATA ACGAGGTTAT TATCCAAAGC ATGACAACAA CAAAAACGCA TGATGTAGAA 
GCAACGGTTG CTCAAATAAA GCGGCTTGAG GAAGCGGGAT GCCAAATTGT CCGCGTTGCT 
TGTCCAGACG AGCGCGCGGC CAACGCTATT CCGGAAATCA AAAAGCGCAT TAACATTCCG 
CTGGTGGCGG ATATTCATTT TGACTATAAA CTAGCCCTTA AAGCGATTGA AGGCGGAGCC 
GATAAAATTC GCATCAATCC TGGAAATATT GGACGCCGTG AAAAAGTGGA AGCGGTCGTG 
AAAGCAGCAA AAGAACGCGG CATACCGATC CGCATCGGCG TCAACGCTGG TTCCTTAGAA 
AAACGGATTT TAGAAAAATA CGGCTATCCT ACCGCTGACG GCATGGTCGA AAGCGCGTTA 
TACCATATTC GCATTTTAGA AGAACTTGAT TTCCACGATA TTATCGTTTC GTTAAAAGCG 
TCCGATGTCC GTTTGGCGAT TGAAGCATAT GAAAAAGCTG CACGGACATT TGATTATCCG 
CTCCATCTCG GCATTACTGA ATCGGGTACG CTATTTGCCG GAACAGTAAA AAGCGCAGCT 
GGGCTCGGTG CCATTTTAAG CAAAGGAATC GGCAATACAA TTCGCGTATC GCTTAGCGCC 
GACCCGGTCG AAGAAGTAAA AGTCGCAAAA GAAATATTAA AGGCGTTCGG ATTAGCGTCC 
AATGCGGCTA CATTAATTTC CTGCCCAACG TGCGGACGCA TTGAAATTGA TTTAATCAGC 
ATCGCTAACG AGATTGAAGA ATATATTTCA AAAATTAAAG CACCAATTAA AGTCGCGGTG 
CTCGGGTGCG CCGTCAACGG GCCTGGCGAG GCGCGCGAAG CGGATATTGG CATCGCCGGA 
GCACGCGGCG AAGGCTTGCT ATTCCGTCAT GGCAAAATCG TCCGTAAAGT TCCAGAAGAA 
AAGATGGTTG AAGAATTGAA AAAAGAAGTC GACAAATTAG CGGAAGAATA CTTCGCAAAA 
CAAAAAGCTT GA 

 

Protein sequence

MGEIIHRSKT RPVRVGNLTI GGNNEVIIQS MTTTKTHDVE ATVAQIKRLE EAGCQIVRVA 
CPDERAANAI PEIKKRINIP LVADIHFDYK LALKAIEGGA DKIRINPGNI GRREKVEAVV 
KAAKERGIPI RIGVNAGSLE KRILEKYGYP TADGMVESAL YHIRILEELD FHDIIVSLKA 
SDVRLAIEAY EKAARTFDYP LHLGITESGT LFAGTVKSAA GLGAILSKGI GNTIRVSLSA 
DPVEEVKVAK EILKAFGLAS NAATLISCPT CGRIEIDLIS IANEIEEYIS KIKAPIKVAV 
LGCAVNGPGE AREADIGIAG ARGEGLLFRH GKIVRKVPEE KMVEELKKEV DKLAEEYFAK 
QKA