| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2320 |
|---|
| Symbol | |
|---|
| ID | 7977816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 2368968 |
|---|
| End bp | 2369861 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644799130 |
|---|
| Product | Polyprenyl synthetase |
|---|
| Protein accession | YP_002950290 |
|---|
| Protein GI | 239827666 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACCGGG CGGAGGTAGA GCAATTTTTA CAACAACAAA AACAGCGTTT AGAAGAATCG
TTGCCGCACT ATATTGCAAG GCTGAATGCT CCTGGAACGA TTAAACGGGC GATGTCTTAT
TCGCTGGAGG CAGGCGGGAA GCGCATCCGT CCGCTTCTGT TGTTTGCGAC GCTGCATTCG
TTTGGAAAAG AACCGGATAT CGGGCTTCCA GTTGCGTGTG CTATTGAGAT GATTCATACA
TACTCATTGA TCCATGATGA TTTGCCAAGT ATGGATAACG ATGATTTGCG ACGAGGGAAA
CCAACGAATC ATAAAGTGTT TGGAGAAGCG ATGGCTATTT TAGCGGGAGA CGGATTGCTC
ACTTACGCGT TTCAAGTGAT TGCGGAAATG AGTGATGCGC GCATCGTTCC GGCGACAAAG
ATTCGTTTAA TCGAAGAACT GGCAAAAGCG GCTGGACCGG AAGGAATGGT GGCAGGGCAA
GTTGCCGATA TCGAAGGAGA AGGAAAACAG CTGTCGCTTG AACAGTTGGA ATATATCCAT
CGTCATAAAA CAGGGAAAAT GCTGCAATAC AGCGTATTGG CAGGAGCGTT GCTCGCAGAT
GCGAAAGACG AGCAGCTGCA CCATCTCCAT ACGTTTGCAT CCCATCTCGG TCTCGCTTTT
CAAATTCGCG ATGACATTCT TGATATCGAG GGCTCAGAAG AAAAGATTGG CAAACGGGTT
GGCAGCGATA TAGAAAATAA AAAAGTGACA TATCCATCGC TTTTAACGAT TGCTGGGGCG
AAAGAAAAGC TATCTTTTCA TATCGCAGAA GCAAAACGTT ATTTGCAAAA AGCAGAAATA
AATGACAGTG TACTAAGTTA TATTTGCGAT TTAGTCGCTA CGCGCGACCA CTAA
|
|---|
| Protein sequence | MNRAEVEQFL QQQKQRLEES LPHYIARLNA PGTIKRAMSY SLEAGGKRIR PLLLFATLHS
FGKEPDIGLP VACAIEMIHT YSLIHDDLPS MDNDDLRRGK PTNHKVFGEA MAILAGDGLL
TYAFQVIAEM SDARIVPATK IRLIEELAKA AGPEGMVAGQ VADIEGEGKQ LSLEQLEYIH
RHKTGKMLQY SVLAGALLAD AKDEQLHHLH TFASHLGLAF QIRDDILDIE GSEEKIGKRV
GSDIENKKVT YPSLLTIAGA KEKLSFHIAE AKRYLQKAEI NDSVLSYICD LVATRDH
|
|---|
| |