| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2316 |
|---|
| Symbol | |
|---|
| ID | 7977812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 2363763 |
|---|
| End bp | 2365484 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644799126 |
|---|
| Product | DNA repair protein RecN |
|---|
| Protein accession | YP_002950286 |
|---|
| Protein GI | 239827662 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTAGCGG AATTATCCAT AAAAAATTTT GCGATTATTG AATCATTGTC CATTTCGTTT
GAAAAAGGAC TGACGGTGTT AACTGGGGAA ACGGGAGCGG GAAAGTCGAT TATTATTGAT
GCGATCCATC TGCTGATCGG AGGACGGGGT TCGGCAGAAT TTGTCCGCTA CGGAGAAGAC
AAGGCGGAAA TAGAAGGACT TTTTTTACTA GATAATGAAA ACCATCCATG TTATGACAAA
TGTGCCGAAG TCGGCATTGA CATTAGCGAA GGCATGGTTG TTTTGCGCCG TGAAATTTTC
GCAACTGGAA AAAGCGTATG CCGCGTAAAC GGAAAATTAG TGACGACGGC TATATTGCGC
GATATCGGTT CTACGCTTGT CGATATTCAT GGGCAACATG AACATCAAGA ATTAATGAAT
CCATCTCGGC ATCTTCCGCT ACTTGATGAA TACGGCGGGG CGGAAATTGC GGAGGCTCTT
GAGGAATATC GCGCCGTTTA TGAGAAGTAT GAACAATTGC GGAAGAAACT AAAAAAGTTA
AATGAAAATG AGCAGCAAAT GGCGCATCGC CTTGATTTAT TAACATTTCA GCTAGATGAA
ATTCAAAAAG CGAATTTACA GCCAAACGAA GATGAACAGT TGATGGAAGA AAAAGTAAAA
ATTATGAACT TCCAAAAGAT TTACGAAGCG CTTAAACATA GTTATGAGGC ATTATCCGGC
GAGCAGCGCG GTCTTGACTG GATTGGTTTG GCAATGAGCC ATTTAGATGA TGTCGCTTCT
ATTGACCCGG CATTAAAAGA AGCGTATGAA ACGATTGCGA ATAGTTATTA TTTATTGGAG
GATATTACGT ATAAATTACG CGATGAACTC GAACAATTGG AATATGAACC AGCCCGCCTT
GATTTTATTG AAAGCCGCCT TAGTGAAATC AATCAATTAA AACGAAAATA CGGATCGACC
ATCGAAGATA TTTTGCAATA TGCAGAAAAA ATTACAGAAG AAATCGATAC GATTCAACAT
CGCGAAACCC ATATTCACGA ACTGCAAAAA GAATTGAAAT CGGTGACGGA AGATTTATTA
ATCGAAGCGA AAAATGTGAC GAATGTTCGC AAAAAGTATG CGAAAACATT AATTAACCAT
ATTCATCAAG AATTAAAAGA GCTGTATATG GAAAAAACAC AATTTGATAT CGTATTTACG
AAACGAGAAG GATCGCTTGA TGCACCGCTG CTTGATGGTG TACCAGTGAA ATTTCATGAA
GATGGTGTCG ATGATGTGGA ATTTTATATT TCCACAAACG TTGGCGAACC GTTAAAACCG
TTAGCGAAAA TTGCCTCTGG CGGGGAATTG TCGCGCATCA TGCTTGCATT AAAAAGCATA
TTTTCCAAAC ATCAAGGAGT TACATCGATT ATTTTTGATG AAGTCGATAC GGGGGTTAGC
GGCCGGGTTG CACAGGCGAT TGCCGAAAAA ATTTACCGCA TCTCCATCGA TTCGCAAGTG
CTTTGCATTT CCCACCTGCC GCAAGTAGCG GCGATGGCGG ATACGCATTT GTTTATTGCG
AAAGAAACAG ATGGAAGCCG CACAAGAACG TCAGTCAAAG AATTATCGGA CGAAGAAAAA
GTAAAGGAAA TCGGCCGGAT GATTTCTGGT GTAGAAATTA CAGAACTGAC GAAAAAACAT
GCAAAAGAGT TGCTTGAGCT AGCAACAAAA ATCAAAGGAT GA
|
|---|
| Protein sequence | MLAELSIKNF AIIESLSISF EKGLTVLTGE TGAGKSIIID AIHLLIGGRG SAEFVRYGED
KAEIEGLFLL DNENHPCYDK CAEVGIDISE GMVVLRREIF ATGKSVCRVN GKLVTTAILR
DIGSTLVDIH GQHEHQELMN PSRHLPLLDE YGGAEIAEAL EEYRAVYEKY EQLRKKLKKL
NENEQQMAHR LDLLTFQLDE IQKANLQPNE DEQLMEEKVK IMNFQKIYEA LKHSYEALSG
EQRGLDWIGL AMSHLDDVAS IDPALKEAYE TIANSYYLLE DITYKLRDEL EQLEYEPARL
DFIESRLSEI NQLKRKYGST IEDILQYAEK ITEEIDTIQH RETHIHELQK ELKSVTEDLL
IEAKNVTNVR KKYAKTLINH IHQELKELYM EKTQFDIVFT KREGSLDAPL LDGVPVKFHE
DGVDDVEFYI STNVGEPLKP LAKIASGGEL SRIMLALKSI FSKHQGVTSI IFDEVDTGVS
GRVAQAIAEK IYRISIDSQV LCISHLPQVA AMADTHLFIA KETDGSRTRT SVKELSDEEK
VKEIGRMISG VEITELTKKH AKELLELATK IKG
|
|---|
| |