| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2223 |
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| Symbol | |
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| ID | 7979411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | - |
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| Start bp | 2280263 |
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| End bp | 2280994 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644799038 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002950198 |
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| Protein GI | 239827574 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000780288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGAT TGCAAAAAGT TATTGCTCAT GCAGGCATCG CATCAAGACG AAAAGCAGAA
CAACTCATAT TGCAAGGAAA AGTAAAGGTA AACGGGAAAG TCGTTACCGA GCTTGGCGTG
AAAGTAGGTC CTCAGGATAA AGTGGAAGTA GATGGGATAC CGGTAGAAAG AGAGGAGCCA
GTATATTATC TTTTTTATAA ACCGCGCGGG GTCATTTCAA GCGTAAAAGA CGATAAAGGT
CGGAAAGTCG TAACCGATTT TTTTAAAGAT GTTGATAAAC GCATTTACCC GATTGGCCGT
CTCGATTATG ATACGTCCGG AATTCTTTTG CTTACGAACG ATGGGGATTT TGCCAATTTA
TTAATGCATC CTCGTTACGA AATCGAGAAA GTATATATCG CAAAAGTGAA AGGGATTCCG
ACACGGGAGC AATTAAAACA GCTTGAAAGA GGAATTATGC TCGAAGATGG CATGACGGCG
CCGGCAAAAG TAAAACTGCT TTCTCACAAT AAACAAAAAC AAACAGCCAT TATTGAAATT
CGCATCCATG AGGGACGGAA TCGCCAAGTG CGCCGAATGT TTGAAGCAAT TGGATGCAAA
GTGATGAAAC TAAAGCGAGA GCGATACGCT TTTCTCGATT TAAAAGGGTT AAACCCTGGT
GAATATCGTA AACTTACACC GCATGAAGTA AAGCAGCTGC GCGCGCTTGC GTTGTCAGGC
GGTGGAAAAT AA
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| Protein sequence | MERLQKVIAH AGIASRRKAE QLILQGKVKV NGKVVTELGV KVGPQDKVEV DGIPVEREEP
VYYLFYKPRG VISSVKDDKG RKVVTDFFKD VDKRIYPIGR LDYDTSGILL LTNDGDFANL
LMHPRYEIEK VYIAKVKGIP TREQLKQLER GIMLEDGMTA PAKVKLLSHN KQKQTAIIEI
RIHEGRNRQV RRMFEAIGCK VMKLKRERYA FLDLKGLNPG EYRKLTPHEV KQLRALALSG
GGK
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