| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2180 |
|---|
| Symbol | |
|---|
| ID | 7976984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 2241885 |
|---|
| End bp | 2243072 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644798995 |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_002950155 |
|---|
| Protein GI | 239827531 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000421211 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGAT TAGCACATCA CCAAGGAATC CACAAGTTTT TCTTCACGCT GGGGTTGACG
CTGCAGCTTT CCAAACCGGT CATCAAGCAT CTCATTCATA TTGTCGATGC CTTGACCACC
AAGGGATTCT CGGGAACATT GACTGATATT CATTACTGGA GCTTTCATCC GAATCATCGA
ACGACGCTCA GTCACTTTTT CACGAAAAGC CCTTGGAACG AGGAAAGGCT GCTTGGGAAG
CTTCAAGAGT GGATCCTTTC CCAGGTCGAA CGACTGGCCA AACGGAAGAA TCAACCCCTT
TTTGTTTCGA TTGATGATAC GATTTGCCAA AAAACAAAGC CTTCGTCACG GGCTGTGCAC
GCCATTCAAG GGTGCGACTG GCACTACTCG CATAAAGATC ATCAATCGGT CTGGGGGCAT
TCGCTCGTTT GGCTGATGGT GCACACCTTC ACGCAGGCGT TCCCATTTGC GTTCCGCCTG
TATGACAAGA AAGCGGGAAA AAGCAAGATC GACCTGGCGA TCGAGATGCT TTCCTCGCTC
AAGGTGAAGC GGGCTCAGCC GGTGTATGTG CTCATGGATT CGTGGTATCC GTCCAAAAAG
CTCATCGAAG CCTGTCTGAA ACAGGGATTC CATGTCATCG CGATGCTCAA GACGAACCGG
ATTCTCTACC CGAAAGGCAT CGCCATCCAA GCCAAGCAGT TTGCCCGCTA TATCGAGTCC
AAAGACACCC GCCTCGTCAC GGTGGGGCAG GAGCGTTATC GCGTGTATCG CTATGAGGGG
GCCATCCATG GCCTCGATGA CGCGGTGGTG CTGCTGGCTT GGAAGGCGGA TCAGCCGATG
GCGCCGGAAC ATCTTCATTG CATCTTGAGC ACCGACCGGG AACTCGGGGA CGAAGACATC
TTGCGTTACT ACGCCCAGCG CTGGACGATC GAGTGCTTTT TCCGGCAGGC GAAAGATCAA
CTGAAGCTGG ATGGATACCG CGTTCGCCAC ATTCGGGCGG TGAAACGGTA TTGGGCGGTG
GTGCTGTTGG CCTGCGTGTA CAGCATCGCC GAATCCCGAC AAAACCTCTC CACCGGGCTG
GAGCTTCTTC GGTCGCGGAA AGACCACAGC GTCGTCGAGT TCATTTATGA CGCTGCGAAG
CAAGATATTC CCATTGATGT GATCAAAAAA CAGCTCCGTA TCGCGTAA
|
|---|
| Protein sequence | MNRLAHHQGI HKFFFTLGLT LQLSKPVIKH LIHIVDALTT KGFSGTLTDI HYWSFHPNHR
TTLSHFFTKS PWNEERLLGK LQEWILSQVE RLAKRKNQPL FVSIDDTICQ KTKPSSRAVH
AIQGCDWHYS HKDHQSVWGH SLVWLMVHTF TQAFPFAFRL YDKKAGKSKI DLAIEMLSSL
KVKRAQPVYV LMDSWYPSKK LIEACLKQGF HVIAMLKTNR ILYPKGIAIQ AKQFARYIES
KDTRLVTVGQ ERYRVYRYEG AIHGLDDAVV LLAWKADQPM APEHLHCILS TDRELGDEDI
LRYYAQRWTI ECFFRQAKDQ LKLDGYRVRH IRAVKRYWAV VLLACVYSIA ESRQNLSTGL
ELLRSRKDHS VVEFIYDAAK QDIPIDVIKK QLRIA
|
|---|
| |