| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2178 |
|---|
| Symbol | |
|---|
| ID | 7976982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 2240018 |
|---|
| End bp | 2241127 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644798993 |
|---|
| Product | transposase, IS605 OrfB family |
|---|
| Protein accession | YP_002950153 |
|---|
| Protein GI | 239827529 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACA AAGCCTATCA GTTCCGTCTA TACCCAACAA AAGAACAAGA AGAATTGCTC
GCCAAAACCT TCGGTTGTGT CCGTTTTGTG TATAACAAAA TGCTTGAAGA ACGCATACAA
ATGTTTGAAA AGTTCAAGGA CGATAAAGAA TCCTTGAAAC AACAAACATT TCCGACCCCT
GCCAAGTACA AAAAGGAGTT TCCTTGGCTA AAAGAAGTGG ACAGCCTTGC GCTGGCAAAT
GCTCAACTAA ATTTGCAGAA AGCGTTTCAA CACTTCTTTT CTGGCCGCGC TGGATTTCCC
AAGTTCAAAA ACCGCAAGGC GAAACAGTCG TACACCACAA ATATGGTAAA TGGCAACATC
AAGCTTTCAG ATGGCTATAT CAAGCTGCCC AAACTGAAAT GGATCAAGTT CAAGCAACAC
CGGGAGATTC CTGCCCACCA TATCATCAAG TCTTGTACGA TCACGAAAAC CAAAACAGGA
AAATACTATA TTTCTATTCT CACAGAGTAC GAACATCAAC CTGCCCTAAA AGAAGTACAA
ACGGTTGTTG GGCTTGACTT TTCCATGAGT ACGCTGTATG TCGATAGCGA GGGTAAGAGA
GCCAATTATC CTCGATTCTA TCGCAAAGCA TTGGAAACAT TAGCGAAAGA ACAGCGTAAA
TTGTCTCGTA AAAAGAAAGG CTCGAATCGT TGGCACAAAC AGCGTCTGAA AGTAGCGAAG
CTGCATGAGA AAATTGCCAA CCAGCGCAAG GACTTTCTGC ATAAGGAGTC GCACAAATTA
GCGAAACGGT ATGATTGCGT GGTCATCGAA GACCTCAACA TGAAAGGGAT GTCACAAGCC
CTCCATTTCG GTCAAGGCGT TCATGATAAC GGCTGGGGCA TGTTCACCAC TTTCCTTCAG
TACAAGCTGG CCGAACAGGG GAAGAAGCTG ATCAAAATCG ACAAATGGTT CCCTTCGTCC
AAAACGTGTT CGTGCTGCGG TCGAGTCAAG GAGTCTCTAT CGCTTTCTGA ACGGACATTC
CGCTGTGAAT GTGGATTCGA GAGCGACAGG GACGTCAATG CGGCCATCAA TATCAAACAT
GAGGGCATGA AACGATTGGC GATCGTCTAA
|
|---|
| Protein sequence | MANKAYQFRL YPTKEQEELL AKTFGCVRFV YNKMLEERIQ MFEKFKDDKE SLKQQTFPTP
AKYKKEFPWL KEVDSLALAN AQLNLQKAFQ HFFSGRAGFP KFKNRKAKQS YTTNMVNGNI
KLSDGYIKLP KLKWIKFKQH REIPAHHIIK SCTITKTKTG KYYISILTEY EHQPALKEVQ
TVVGLDFSMS TLYVDSEGKR ANYPRFYRKA LETLAKEQRK LSRKKKGSNR WHKQRLKVAK
LHEKIANQRK DFLHKESHKL AKRYDCVVIE DLNMKGMSQA LHFGQGVHDN GWGMFTTFLQ
YKLAEQGKKL IKIDKWFPSS KTCSCCGRVK ESLSLSERTF RCECGFESDR DVNAAINIKH
EGMKRLAIV
|
|---|
| |