| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_2055 |
|---|
| Symbol | |
|---|
| ID | 7977291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 2116095 |
|---|
| End bp | 2116973 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644798873 |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_002950043 |
|---|
| Protein GI | 239827419 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.862347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAGC ACTTTCATTT TACTACAGAT CCAGCCAAAC TTCAAAAACA ATATGCCGCT
ATTTTCTGTT TTGTTTCTGC CCAACTGTCG TTGATTCAAA TGTATCTTCA TCGCCGCAAC
CGTCACTTGG TCAAGCAAGA AGACGAAGTG GTCATGGCGG TTCACCTTTT GGGGAAGCTG
CTGGGCTTTT CTTCCGAACG AGCCTGGCAT CGTTTTGTCA CGGGAAATTT GTTCACAAAC
GGCTCGTTTC TTGAACGATC CCGATACAAC CGCCGCTGCC GGGCGCTTGG TTTCGCCATC
AAATGGATCC GTCATGAGCT GGCGAAACGT GGCCAACACC ATGCTTATGC GGTCGTCGAC
AGCTTGCCTC TTCCGTTGTG CCATCCCGCA AGAATGCAGC GCGTCAAGCG GTTTCGAGGG
ATCGCGGATA TGGGGTATTG TGCTTCCAAA AAGCAATGGT ACTACGGTTT CAAGCTGCAT
CTTCAAGTGA CCAATCAAGG GCTGGCCATG GGCTATGTCG TGACGGAAGC GTCCTGCCAC
GACGTCAAAG CCGCTGAAAC GGTGATGACT CAAATCCCTC ATCCCTACAA CTTTGGGGAC
AAAGGGTACA TCAGCCACGC TCTTCGAGAA AAGCTGTACA AAGAACACCA AGCCGCGTTC
TGGACACCGT CTCGACACAA TCAAAAGCAC GGCCCATCCA AGGCATGGGA AGAATGGATC
AGGAAAAAAC GCAAAGTCAT CGAGACGGTG TTTTCGATTC TCGTAGACCA ATACCGGATC
ACCGACATTC GAGCGAATTC CATTGCCGGG TTTGAAGTGG CACTCGATGG CATCTTGTTG
GCTTATTCCT TGGTCACACT AGGGCTGGTT GAGCGCTGA
|
|---|
| Protein sequence | MQEHFHFTTD PAKLQKQYAA IFCFVSAQLS LIQMYLHRRN RHLVKQEDEV VMAVHLLGKL
LGFSSERAWH RFVTGNLFTN GSFLERSRYN RRCRALGFAI KWIRHELAKR GQHHAYAVVD
SLPLPLCHPA RMQRVKRFRG IADMGYCASK KQWYYGFKLH LQVTNQGLAM GYVVTEASCH
DVKAAETVMT QIPHPYNFGD KGYISHALRE KLYKEHQAAF WTPSRHNQKH GPSKAWEEWI
RKKRKVIETV FSILVDQYRI TDIRANSIAG FEVALDGILL AYSLVTLGLV ER
|
|---|
| |