Gene GWCH70_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_2009 
Symbol 
ID7979494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp2068682 
End bp2069410 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content38% 
IMG OID644798834 
ProductCRISPR-associated protein Cas6 
Protein accessionYP_002950004 
Protein GI239827380 
COG category[L] Replication, recombination and repair 
COG ID[COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID[TIGR01877] CRISPR-associated endoribonuclease Cas6 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTT CTTGTTCCTT TGAAACTGAT AAAATTCCTA TTCATTATCG AATGGCAATG 
GTGTCCATTA TCAAAGAAGC ATTACGAATA TCTGATGAAG AATATTATCA TCGTCTGTAT
CAGAGGGGGC AACGGACAAA GCCTTTTGTA TTTTCTACAT ATTTAAAAAA CTTTCACATC
ATAAATCATG AAATCGAATT AGATGGCATT ACGTTAACTG TCAGTTCCCC TGACCATGAG
TTTTTATTGA ATTTATACAA TGGCTTGCAA AAAAACCAGG CTTTTTCTTA TAAAGATTAT
CATTTTGTGA AAAAGAAAAT TGCGGTTGTC AAAGAGAAGC AAGTGACGAG TCCGTCTGTT
GTTTTTCGTA CTCTTTCACC AATACTCATC GAGGATGAAA AAGGAAATCC GATTGCTCCT
GATGATGCAA GCTATGAAGG GCATGTCAAC TACGTAGCGG ACATGATTTT ATCGCAATAT
CGCGGCAAAG GGCTATATGC TCCTCTCTCT ATTAAGCCTA TATATTTTAA AAAAGTTGTA
GTAAAGGAAT CCAATCATGA GTTTGCCGCC ACACACGGGA ATGATGAATA TTTATATTTC
ACCGCTTATC ATGGGTTATT TGCGATCACA GGGCATCCAG GAGATTTACA GCTATTGTAC
CAGCTTGGAT TGTCCAAACG GCGAAATCAA GGATTCGGGC AATTAGAAAT CGAGGAGGTG
AGGGGATGA
 
Protein sequence
MRISCSFETD KIPIHYRMAM VSIIKEALRI SDEEYYHRLY QRGQRTKPFV FSTYLKNFHI 
INHEIELDGI TLTVSSPDHE FLLNLYNGLQ KNQAFSYKDY HFVKKKIAVV KEKQVTSPSV
VFRTLSPILI EDEKGNPIAP DDASYEGHVN YVADMILSQY RGKGLYAPLS IKPIYFKKVV
VKESNHEFAA THGNDEYLYF TAYHGLFAIT GHPGDLQLLY QLGLSKRRNQ GFGQLEIEEV
RG