| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1982 |
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| Symbol | |
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| ID | 7978941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | - |
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| Start bp | 2041343 |
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| End bp | 2043373 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644798809 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002949979 |
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| Protein GI | 239827355 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0102834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGTA AGTATGCTGC TTTTTTCCAT CATTTTACCG AGGCAGTCGC GATTTTAAAT
ACAGAAGGAT ATGTCATTTA TACGAATCCT GCGTTTCAAG CACTGTTAGG TACAAATGGC
AGCGGCGCGG TACGACACGC CCATTTTGAA ACCATTGCTG AGATGGAAAC CATCGTAGTA
GAACCGTTAT TGCAATCGGT TAGAAACGGG AAATCCATAC ATAATGTAGA ATGGACGATT
AAAAAAGCGG ATGACCGTAT CGTTCCAGTG AGTGCTGTTT TTTCGCCGAT TGTAAATGAA
CAAGGAGAAA TCGATTCGAT TTTGTGCGTA TGCCGCGATG TGACGAAGGA AAAGAAACTA
GAACGAGCAT TGGAAGAAAG CAAACAACAT TTTCAACTCA TCGCTGAACA TTCTACGGAT
TATATTCTTA TTTTTTCCAA TAAACGTGAG CTATTATACA TACCATCATC TCTTGAGAAA
GTAGGCACGG CAATTCACCA ATATTCGTAT GAAGATATCT TACAATTTGT GCATCCTGAT
GATTTGCCGA ACATTGTGAG GAAGTTTGAT GAGCTATATC GTACATATGA CACTCAAATC
GCTGAATTTC GCAAGCGCGA TAACGAAGGA AAATGGATAT GGATGGAAGC GCAAGGGAAA
GCGATTGTGA ATGAACAAAA TGAACTTGAT TATGTGATTG TGACGGTGAA AAACATTGGC
GAACGGAAAA AATACGAGGA AAAGTTACGG CAGCTTGCCT ACTTTGATTC GTTAACAGGC
ATTGCGAACC GCAGCTATTT TGAGAGATAC ATAAAGCAGC TGATCGAAAG CCAAACCGAT
TTTGCGTTAT GTTATTTGGA TTTTGATAAA TTTAAATGGA TTAACGATCA CTTTTCCCAT
CAAGCTGGCG ACTATTTTTT GCAGGAAGCG GTAAGAAGGG TGCAAAGCGT GCTACGTACA
GAAGATTTTT TTGCGCGCAT TGGCGGAGAT GAATTTGTAC TTTTGCTTCC GAACATAACG
AAAGAAGAAG TGACGAAACT CGCCGATGAG CTTGTTCAAA CGTTTCATAA GCCGTTTTAT
TATGAAAAAC AGCTTATTCA GTCTACGCTA TCGATGGGAA TTGCTTTTTT TCCAAAAGAT
AGCGACCGAA TTGAGCAAGT CATGAAATAC GCCGATCAAG CTCTATATAA TGTGAAAAAA
AGAGGAAAAA ATGGTTATGA GTTTTATCGA CCGACGCAAA ATCGGAAAGC GATCATTGAA
CAAGATTTGC CGTTTGCGAT TTTGCGTGAG CAATTTTATT TATGCTACCA GCCGAAAATT
AAGCTTGACA GCGGTGCAAC GATGGGAGTG GAAACACTGT TGCGTTGGCG CCACCCATCG
CTTGGAGAAA TTCCACCGCT CGACTTTATT CCACTTGCCG AACAGAGCGG ATTCATTTTT
GAAATTACGT TATGGGTGCT TGAACATTCG TGCCGCCAAG TGAAAGAATG GCAGACGCAA
TTCCCTGGGC TGAAATTAGC TGTCAACTTA TCGCCGTTTT TATTAAATCG AACGGAATTG
GTTCAGCATA TTGTCCATAT TTTACGGGAT ACGCATTTTG CGCCAGAGCA TTTAATTTTG
GAAGTGACAG AAAGCGGCTT GATGGAAAAC TTTGAAACGG GCAAGCATAT TTTAACTCAG
TTAAAAAATA TCGGCGTGCA AGTAGCCATT GATGATTTCG GCACAGGATT TTCTTCGTTG
GCGTACATTC GGAATCTGCC GGTGTCTTTA TTAAAAATTG ACCGCAGCTT TATTCAAGGA
ATTGCGGAGA ACTCGAAAGA TGCAACGATT GTCGATACGA TTATTCATTT AGCGAAAAGC
TTGGATATTC AAGTATTGGC GGAAGGCGTC GAGACGTATC ATCAAGTAGC GCTTCTCCAA
CAGATGGATT GCGACTTTGC CCAAGGATTT TACTTTAGCA AGTCGTTAGA AGCCGAGAAG
TTGCAAAAAT GGCTAGAAGA GTATATGGTA TTTGATTCTC ATCCCTTCTA A
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| Protein sequence | MTGKYAAFFH HFTEAVAILN TEGYVIYTNP AFQALLGTNG SGAVRHAHFE TIAEMETIVV
EPLLQSVRNG KSIHNVEWTI KKADDRIVPV SAVFSPIVNE QGEIDSILCV CRDVTKEKKL
ERALEESKQH FQLIAEHSTD YILIFSNKRE LLYIPSSLEK VGTAIHQYSY EDILQFVHPD
DLPNIVRKFD ELYRTYDTQI AEFRKRDNEG KWIWMEAQGK AIVNEQNELD YVIVTVKNIG
ERKKYEEKLR QLAYFDSLTG IANRSYFERY IKQLIESQTD FALCYLDFDK FKWINDHFSH
QAGDYFLQEA VRRVQSVLRT EDFFARIGGD EFVLLLPNIT KEEVTKLADE LVQTFHKPFY
YEKQLIQSTL SMGIAFFPKD SDRIEQVMKY ADQALYNVKK RGKNGYEFYR PTQNRKAIIE
QDLPFAILRE QFYLCYQPKI KLDSGATMGV ETLLRWRHPS LGEIPPLDFI PLAEQSGFIF
EITLWVLEHS CRQVKEWQTQ FPGLKLAVNL SPFLLNRTEL VQHIVHILRD THFAPEHLIL
EVTESGLMEN FETGKHILTQ LKNIGVQVAI DDFGTGFSSL AYIRNLPVSL LKIDRSFIQG
IAENSKDATI VDTIIHLAKS LDIQVLAEGV ETYHQVALLQ QMDCDFAQGF YFSKSLEAEK
LQKWLEEYMV FDSHPF
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