Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1970 |
Symbol | |
ID | 7978930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 2031705 |
End bp | 2033735 |
Gene Length | 2031 bp |
Protein Length | 676 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644798797 |
Product | acetoacetyl-CoA synthetase |
Protein accession | YP_002949967 |
Protein GI | 239827343 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00129339 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAATTCTG CGTTTTTTGC GCAGATGGAT ATGAAAGCGA TTACGGATGG GACGGTATTA TGGACGCCGA CAGAGGAACA TATTCAACGC TCGAATATTA AGCGCTATAT GAATTGGTTA AAGGAAAAAA AGGGACTATC ATTTGAAACA CATCGACAAT TATGGAATTG GTCCGTTGAA CAGCTAGAAG AATTTTGGGA ATCGGTGTGG GAGTATTGCG AGGTGAAATC GGCGACTCCT TACCGTTGCG TTTTGGAAGA GCGGAAAATG CCGGGAGCGA AATGGTTTCC AGGTGCGACG CTAAATTACG CGGAGCACGT ATTTCGAAAT GAGCGATCCG ATCGCCCAGC GCTTCTTTTC CGTTCCGAGC GCGTGCCTTA TCGTGAAGTG ACTTGGAAAG AGCTGAAAGA AAAAACGGCG GCGGTCGCAA GCGCGCTCAA AAAAATCGGC GTCAAACCGG GAGACCGAGT GGTGGCATAT ATGCCAAACA TTCCGGAAAC CGTCATCGCC TTCTTAGCGT GCGCCAGCAT TGGGGCGATT TGGTCGAGCT GTTCTCCGGA TTTTGGTGCA AACAGCGTCA TTGACCGATT CCAGCAAATT GAACCGGTTG TGCTTTTTGC GATTGACGGA TGCCAATATG GCGGGAAAGA GTTTGATAAA CGTCCGATTG TCGACGAATT GCGGGAAAAA TTGCCGTCGC TCAAAAAAAC GATTTTGCTT CCATATTTGC GGGAAGACGT ACAAGCACCG GATGATTCCG TTTTATTATG GGATGATATC ATTCGGGAAA AAGCGGAACT TACTTACGAA TACGTTCCGT TTGACCATCC GCTTTGGATT TTGTATTCCT CCGGTACAAC AGGCTTGCCG AAGCCAATCG TTCAAGGGCA TGGCGGCATT TTGCTCGAAC ATTTAAAATC GCTCTTGATT GAAGAAAATC TGACAAAGGA AAGCACATTT TTCTGGTTTA CGACAACGGG ATGGATGATG TGGAATTTTC TCATCGGCGG ATTGTTAGTC GGAGCGTCGG TCGTGCTTTA TGACGGAAGT CCGACGTATC CGGATGGAAA CGTGTTATGG GAGCTGGCGG AAAAGGCGCG CATTACCCAT TTCGGAACAA GCGCAGCGTT TATTAACGTT TGTATGAAGC TTGGCATTAA GCCAAAAGAA TTGTACGATT TTTCCGATTT ACAAGCCGTT CTTTCAACAG GTTCGCCGCT GACGACGGAA GGATTTGCTT GGGTATACGA AAACGTGAAA GACGATATTT GCCTAGTTTC GTGCAGCGGC GGGACGGACG TATGCACCGC TTTCGTTGCC GGTTCGCCAA TCTTGCCGGT TCGTGCGGGG ATCATCCAAT GCCGTTCGTT AGGGGCTAAT GTACAAGCAT TTGATGAAAA TGGAAATCGC TTAATTAATG AAGTGGGAGA GCTAGTCATT ACCGACCCAA TGCCATCGAT GCCGCTGTTT TTCTGGAATG ATCCAAATTA CGAGCGATAT TTGGACAGCT ATTTCGATAC GTATCCAGGA ATTTGGAAGC ACGGGGATTG GATTAAAATC GACGAAGAAG GCGGCTGCGT CATTTACGGG CGTTCTGATT CGACGATTAA TCGCGCCGGC GTCCGCATGG GAACAAGTGA AATTTACCGC GCTGTCGAAG CACTCGATGA AGTGCTCGAA AGTTTGATCA TCGATTTAGA ACTGATGGGA AGAAAATCGT TTATGCCGTT GTTTGTCGTG CTTCAGCCAG GAGCGTCATT AGATGAGGAG CTAAAGGAGA AAATCAAAAA CGAAATTCGC CAAAAAGTAT CGCCGCGCTT TGTCCCAGAT GAAATTTACC AAGTCGAGCA AATTCCAAAA ACATTAAACG GAAAGAAAAT GGAAATTCCA ATTCGCAAAG TACTGTTGGG CTTTCCGCTC GAAAAGGCCG TCAATCCTGG AGCGATGGCG AATCCGGAGG CGCTACAGTT TTTTATTGAA TTATCAAAGC AGCTAACAAA CAGTAAACAG GATAGTTTAT CTAATCATTA A
|
Protein sequence | MNSAFFAQMD MKAITDGTVL WTPTEEHIQR SNIKRYMNWL KEKKGLSFET HRQLWNWSVE QLEEFWESVW EYCEVKSATP YRCVLEERKM PGAKWFPGAT LNYAEHVFRN ERSDRPALLF RSERVPYREV TWKELKEKTA AVASALKKIG VKPGDRVVAY MPNIPETVIA FLACASIGAI WSSCSPDFGA NSVIDRFQQI EPVVLFAIDG CQYGGKEFDK RPIVDELREK LPSLKKTILL PYLREDVQAP DDSVLLWDDI IREKAELTYE YVPFDHPLWI LYSSGTTGLP KPIVQGHGGI LLEHLKSLLI EENLTKESTF FWFTTTGWMM WNFLIGGLLV GASVVLYDGS PTYPDGNVLW ELAEKARITH FGTSAAFINV CMKLGIKPKE LYDFSDLQAV LSTGSPLTTE GFAWVYENVK DDICLVSCSG GTDVCTAFVA GSPILPVRAG IIQCRSLGAN VQAFDENGNR LINEVGELVI TDPMPSMPLF FWNDPNYERY LDSYFDTYPG IWKHGDWIKI DEEGGCVIYG RSDSTINRAG VRMGTSEIYR AVEALDEVLE SLIIDLELMG RKSFMPLFVV LQPGASLDEE LKEKIKNEIR QKVSPRFVPD EIYQVEQIPK TLNGKKMEIP IRKVLLGFPL EKAVNPGAMA NPEALQFFIE LSKQLTNSKQ DSLSNH
|
| |