Gene GWCH70_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1953 
Symbol 
ID7978776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp2012394 
End bp2013863 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content39% 
IMG OID644798781 
Productanion transporter 
Protein accessionYP_002949951 
Protein GI239827327 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0312845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAGC TGGAAAAGAG TAAGTTAAAA ATGGCATGGT TAATCTTAGC TTTTGTAGTA 
CTGATAGTTA TTATTTTGCT GCCGAATCCA GTCGATTTAC CTGTGGCTGG CCAAAGAGCT
TTAGCCATTT TAGCATTTGC CGTTATTTTA TGGGTAACAG AAGCGGTGTC TTATCCGGTA
AGTGCAGCGA TGATTATCGG TCTTGTAGGT TTACTGCTTG GTATGGCACC TGGTATTGAT
AATCCTTCCG TCAACATTGG GACAAGCGAG GCACTGAAAA TGGCATTATC GGGATTTAGT
AATCCAGCGG TAGCATTAGT AGCGGCAGCG CTTTTTCTTG CGGCAGCTAT GCAAGCTACT
TCTCTTGACA AACGGCTCGC ACTATGGATT TTATCTCATG TTGGAACGAA AACAAGAAAT
GTTGTTATAG GCACAATTGT CGTATCTGTT GTTTTAGCCT TTTTTGTTCC AAGCGCAACA
GCACGGGCGG GTGCAGTCAT TCCGATGTTG CTGGGAATGG TAGCTGCATT CGGATTGCCA
AAAGATAGCC GATTAAGTGC ACTTCTTGTT ATTACAGCGG TACAAGCAGT TTCAATTTGG
AATGTAGGAA TTAAGACAGC AGCTGCACAA AATATGGTTG CTTTAGGATT TATGGAGAAA
GAGTTCGGTA CATCGATTTC GTGGAGTTCT TGGTTTCTAT ATGCAGCTCC TTGGTCCGTT
TTAATGTCCA TTGTTCTTTA TTTCGTCATG ATCAACTTAA TAAAACCTGA GACGAAAGCG
ATAGAAGGGG GACAAGCATT AATATCTTCG CAACTAAAAG ATTTAGGACC GTTGAAACCA
GCTGAGAAAC GACTTATCAT TATTTCCATT ATCCTTCTTT TATTTTGGGC GACAGAAGAA
AGACTCCATG CTTTTGATAC TACAACAGTG ACTCTTGTAG CAGTGGCAAT TTTGTTAACT
CCTAAGATTG GCGTATTTGA TTGGAAATCT ATTGAAAAGC TTATTCCATG GGGAACGATT
ATTGTGTTTG CGGTCGGTAT TGCTCTTGGT ACGATTTTAT TAGATACGAA AGGGGCTCAA
TGGTTATCGA ATAAAGTATT TGAAATAATG GGATTAGAAA AAATGCCTAT TCTTATAATC
ATTGCAATCG TTTCGCTATT TAATATACTT ATTCATTTGG GTTTTGCTAG TGCAACAAGT
TTATCATCTG CGTTAATCCC TATAATGATA GCGTTTACAT CAACTGTTGA TTTAAATGTT
AACAGTATTG GTTTTGTTCT AATCCAACAG TTTGTCGTTA GTTTTGGATT TTTACTGCCG
GTAAGCGCAC CGCAAAATAT GCTAGCGTAT GGAACAGGTG CTTTCAAGGT AAAAGATCTC
TTGAAGTCGG GTATTCCTTT AACTGTTATG GGCTATTTAC TAATTCTCTT ATTTAGTGCT
ACTTATTGGA AATGGATTGG ACTATTATAA
 
Protein sequence
MKKLEKSKLK MAWLILAFVV LIVIILLPNP VDLPVAGQRA LAILAFAVIL WVTEAVSYPV 
SAAMIIGLVG LLLGMAPGID NPSVNIGTSE ALKMALSGFS NPAVALVAAA LFLAAAMQAT
SLDKRLALWI LSHVGTKTRN VVIGTIVVSV VLAFFVPSAT ARAGAVIPML LGMVAAFGLP
KDSRLSALLV ITAVQAVSIW NVGIKTAAAQ NMVALGFMEK EFGTSISWSS WFLYAAPWSV
LMSIVLYFVM INLIKPETKA IEGGQALISS QLKDLGPLKP AEKRLIIISI ILLLFWATEE
RLHAFDTTTV TLVAVAILLT PKIGVFDWKS IEKLIPWGTI IVFAVGIALG TILLDTKGAQ
WLSNKVFEIM GLEKMPILII IAIVSLFNIL IHLGFASATS LSSALIPIMI AFTSTVDLNV
NSIGFVLIQQ FVVSFGFLLP VSAPQNMLAY GTGAFKVKDL LKSGIPLTVM GYLLILLFSA
TYWKWIGLL