Gene GWCH70_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1947 
Symbol 
ID7978771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand+ 
Start bp2006795 
End bp2007445 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content47% 
IMG OID644798775 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_002949945 
Protein GI239827321 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0624164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTACTG CTTTCATTCA CGGCTTTATC CTAGCGCTTG GCCTGATTCT TCCGCTCGGC 
GCGCAAAATG TATTTGTCTT TCAGCAAGGA GCGATGCAGC CCCGCTTTTT ACGGGCGCTT 
CCCGCAGTGC TTACCGCGGC GCTGTGTGAT ACGGCGCTCA TTTTATTGGC GGTGCTCGGC 
GTGTCGGTGG TTGTGTTTAC GATGCCCTGG CTGCAAACGA TCCTATTTAC CGTTGGTTTC 
TTTTTTCTAT TATATATGGG ATGGACGGTT TGGAAGAGCC AGCCGTCTTC TGCGAACGAT 
CAAGGGTCGA TGCCGCCGAA AAAACAAATA CTGTTTGCCC TTTCTGTTTC ATTGCTAAAT 
CCTCACGCGA TATTGGACAC CATCGGGATG ATTGGCACCA ATTCATTGAA TTATGACGGG 
GCCGAAAAAG TTACTTTTAC CGGTGCCTGC ATTTCTGTTT CCTGGCTGTG GTTTTTCTTT 
CTTGCCATTG CCGGAAAAAC GATTGGCCAG ATTGATCAAA AAGGAACGCT GATGAAACGC 
ATCAATCAAC TTTCCGCTCT CATTATATGG GCGGTGGCGG TGTATCTCGC TGTGGAATTA 
TTGAACAATG CAATTCATAA AAGATTTACG CTAAAAAATG TCATTTTATA G
 
Protein sequence
MLTAFIHGFI LALGLILPLG AQNVFVFQQG AMQPRFLRAL PAVLTAALCD TALILLAVLG 
VSVVVFTMPW LQTILFTVGF FFLLYMGWTV WKSQPSSAND QGSMPPKKQI LFALSVSLLN 
PHAILDTIGM IGTNSLNYDG AEKVTFTGAC ISVSWLWFFF LAIAGKTIGQ IDQKGTLMKR 
INQLSALIIW AVAVYLAVEL LNNAIHKRFT LKNVIL