Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1944 |
Symbol | |
ID | 7978768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 2004653 |
End bp | 2005321 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644798773 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_002949943 |
Protein GI | 239827319 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGGAAA TTCCATTTGC CATTGTTTTC GATATGGACG GCACGCTGTT TCAAACGGAA ACCGTCCTTG TTCCTGCCCT GCATAAGACG TTTGATCGGT TGCGCCGCGA AGGGCTGTGG CAAGGGGACA CCCCAGTCAA GGAATATTTG CGGATTCTTG GCGTCCCAGT TTCAGAAGTA TGGCGCCAAT TGATGCCGGA AGCAAGCGAA TCGGTGCGCG ACCGAGCAGC CGCATGGTTT TTGGATGATA TCATTGATGA AATCGAGCAA GGAAACGGGC GGTTATACCC AGACGTGCAC ACGACGCTTG CGGTCCTCGC TGATCAAGGA ATTCCGCTTT TTGTCGCAAG CAACGGGCGT CAGCGCTATC TCGCCGCGAT TCGGACCGCC TTTTTGCTCG AGCGCTATTT TATCGATTTT TACAGTCTCG ATCGGTTTTC TCTGATGTCG AAGTCTGCGT TAGTCAAACA GCTGTTGAAT GATTACGGGA TTGAAAAAGC GGTGATGGTC GGAGACCGGC GTTCCGATAT TCAAGCGGCG AAGGATAATG GGATTTGGTC GATTGGATGC CGGTTTGGAT TTGCCGCGGG GGAAGAGTTG GCAGAAGCGG ATGTAGTGAT CGAGCAGTTT CGCGAATTGG CCGCGCTCGA TTGGCCACCG CTTGTTTGA
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Protein sequence | MREIPFAIVF DMDGTLFQTE TVLVPALHKT FDRLRREGLW QGDTPVKEYL RILGVPVSEV WRQLMPEASE SVRDRAAAWF LDDIIDEIEQ GNGRLYPDVH TTLAVLADQG IPLFVASNGR QRYLAAIRTA FLLERYFIDF YSLDRFSLMS KSALVKQLLN DYGIEKAVMV GDRRSDIQAA KDNGIWSIGC RFGFAAGEEL AEADVVIEQF RELAALDWPP LV
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