Gene GWCH70_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1943 
Symbol 
ID7978767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp2002733 
End bp2004415 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content48% 
IMG OID644798772 
Productlong-chain-fatty-acid--CoA ligase 
Protein accessionYP_002949942 
Protein GI239827318 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATC GCCATTTTCC ATATTGGCCA AAACGGTTGA GCAAAACGCT GACCGTGCCG 
GAAACGACGA TCGTCGATCA TTTAGAAACG ACAGCGAAGC GCTACCCTCA AAAAACCGCC
ATCCACTACT ACGGTGCCTC TTACTCTTAC AAACAATTAT GGGAGCAAGT CAACGCGCTT
GCCGGCTACC TGCAGCAAAA ACTTTCCATC CAACCAGGCG ACAGAGTGCT TTTATACATG
CAAAATTCCC CGCAATTTAT CATTTCCTAC TATGCAATTT TACGTGCGGA AGCGATTGTT
GTTCCGATTA ATCCGATGAA TACAACCGAA GAGCTTTCGT TCTATATTCA AGACTGCGAA
ACGAAAGTCG GAATCGTCGG TCAAGAATTA TTTGGAAAAG TAGAACCGTT GCTTTCGTCC
ACAACGTTAG AACATGTTAT TGTCGCTGCT TATTCGGATT ATATCGCCGC ACCTTATCCC
GTTTCTCTTC CTGACGAGGT GGCATTGCCG CGGCAGGCGT ATGCCAATGA CCGTGTATAC
TATTGGACAG ATTGTTTAGA GGCGAATCTT CTGCCGAAAG AATATAAAGG CCATATCGAT
GATATTGCTG TGCTGCCGTA TACATCGGGA ACAACGGGAG TGCCAAAAGG GTGCGTTCAT
TCGCACCGGA CGGTAAACGC CAACATTGTC AGCGCCTATC ATTGGGCAAA CGTGACAAGC
GATACGGTTT GCCTCGTCAC CTTGCCGCTC TTTCACGTTA CCGGAATGGT CCACAGCATG
CATCTTCCAA TTTTTGCGGG AGCGGCGATG GTGATGCTCA CCCGCTGGAA TCGCGATAGT
GCCGCGCGTT TGATTGAAAT GCATCGCTGT ACACATTGGG TCAATATTAG CACGATGCTT
ATTGACTTTT TGGCCAATCC GTCATTGTCA AAATATGATA TTTCTTCTCT TGCTAGCATC
GCTGGCGGGG GCGCGCCGCT TCCAGAAGCG GTCGGAGAAA AATTGTTTAA GCTGACAGGA
GTGCAATACA TGGAAGGATA TGGGCTTTCC GAAACGATTT CGCATACCCA TTTCAACCCG
CCGGATCGTC CGAAATTGCA ATGCTTGGGC ATTCCATCGT TTGACGTCGA CGCCCGCATC
ATTGACCCGG CTACTGGAAA AGAGCTTGGC GTCGGGGAAA TCGGGGAAAT CGTCGTGCAC
GGCCCACAAG TGTTTAAGGG ATATTATCGC CGTGAAAAAG AAACGGAAGA AGCGTTTATT
GAAATCGATG GAAAACGGTT TTTCCGCACC GGCGATATCG GCCGCATGGA TGAGGAAGGA
TATTTCTTCA TTGTCGACCG CGTCAAGCGG ATGATCAACG CGTCCGGCTA TAAGGTATGG
CCGACCGAAG TTGAATCGTT GCTCTATAAG CATCCGGCCG TGCAACAAGC GTGCGTCATT
GGTGTTCCTG ATCCGCGCCG CGGCGAGACC GTGAAAGCAT TTATTGTGCT TCAAGATGAG
TACGTAGGCA AAATCACAGA AGAAGAAATT ATGGAATGGG CGAAAACTCA AATGGCCGCC
TATAAATATC CGCGCATCGT CGAATTCCGT TCGTCGCTGC CGATGACATC AAGCGGAAAA
TTATTGTGGC GGAAATTGCA AGAAGAAGAG TATCAAAAAT TAGAAAAAGG GGCAAAAACA
TGA
 
Protein sequence
MNNRHFPYWP KRLSKTLTVP ETTIVDHLET TAKRYPQKTA IHYYGASYSY KQLWEQVNAL 
AGYLQQKLSI QPGDRVLLYM QNSPQFIISY YAILRAEAIV VPINPMNTTE ELSFYIQDCE
TKVGIVGQEL FGKVEPLLSS TTLEHVIVAA YSDYIAAPYP VSLPDEVALP RQAYANDRVY
YWTDCLEANL LPKEYKGHID DIAVLPYTSG TTGVPKGCVH SHRTVNANIV SAYHWANVTS
DTVCLVTLPL FHVTGMVHSM HLPIFAGAAM VMLTRWNRDS AARLIEMHRC THWVNISTML
IDFLANPSLS KYDISSLASI AGGGAPLPEA VGEKLFKLTG VQYMEGYGLS ETISHTHFNP
PDRPKLQCLG IPSFDVDARI IDPATGKELG VGEIGEIVVH GPQVFKGYYR REKETEEAFI
EIDGKRFFRT GDIGRMDEEG YFFIVDRVKR MINASGYKVW PTEVESLLYK HPAVQQACVI
GVPDPRRGET VKAFIVLQDE YVGKITEEEI MEWAKTQMAA YKYPRIVEFR SSLPMTSSGK
LLWRKLQEEE YQKLEKGAKT