Gene GWCH70_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1918 
Symbol 
ID7978744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp1975361 
End bp1976143 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content43% 
IMG OID644798749 
ProductHydroxypyruvate isomerase 
Protein accessionYP_002949919 
Protein GI239827295 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0177301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGAT TTGCCGTTAA CGTATCGACA ATTTTTACAG AAGTGCCGTT TCTAGAGCGG 
TTTCAAAAGG CGAGAGAGTG CGGTTTTTCG CTCGTGGAAT GCCAATTTCC ATACGAATAT
CCGATCGAAC GCATTCGCGA TGAGCTTCAT CAGAACCAAT TGTCTCTCGT GTTAATCAAT
TTGCCGCCAG GAAATTGGGA AAAAGGAGAT AGAGGAATCG CGATTTTCCC AGATCGGACG
GCCGAGTTTC AGCGTTCCGT GGAAGAAGGA ATTCGGTATG CGACCGAGTT GAACGTTCCG
TATATCCATT GTATGGCGGG AGTGCTTCCA GCCGATTTAG ACAGGCAAAA GGCGAAAGAA
ACGTACATGC GCCATCTTTA TGATGCGGCA AAAGAAATGG CGAACCATTC GTTAACGCTT
TTAATTGAAC CGATCAATCC GTTTGATATG CCGAATTATT TTTTGACGAA TATTCATGAA
GCCGTTTCGA TGATTAAAGA AATTGGGATG GCAAACATCA AACTTCAATA CGATTTTTAT
CATATGCAGC GGATTCAAGG AAACTTAGCG GCGACATTTG AAACGTATTT TGAATGGATT
GCACATGTAC AAATTGCTGA CGTTCCAGGA CGGCACGAGC CGGGAACGGG AGAAATTCGC
TATGAATATA TTTTTCGTCA TTTAGAGAAA TGTGGATATA AAGGGACGAT CGGTCTTGAA
TATATTCCAT CGGGAAAAAG CGAACAAAGT TTTTATTGGC GTACGTTATA CGCTTGTCAT
TGA
 
Protein sequence
MNRFAVNVST IFTEVPFLER FQKARECGFS LVECQFPYEY PIERIRDELH QNQLSLVLIN 
LPPGNWEKGD RGIAIFPDRT AEFQRSVEEG IRYATELNVP YIHCMAGVLP ADLDRQKAKE
TYMRHLYDAA KEMANHSLTL LIEPINPFDM PNYFLTNIHE AVSMIKEIGM ANIKLQYDFY
HMQRIQGNLA ATFETYFEWI AHVQIADVPG RHEPGTGEIR YEYIFRHLEK CGYKGTIGLE
YIPSGKSEQS FYWRTLYACH