| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1905 |
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| Symbol | |
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| ID | 7978734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | - |
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| Start bp | 1957797 |
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| End bp | 1959503 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644798736 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002949906 |
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| Protein GI | 239827282 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00246734 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTATGATC ATGATCAACA ACTAATAGAT ATACATACGT TCGCTGGAAT TGCAAAAAAT
ATTTTTGAAT ATTCTAACGA AAGCATTATT ATTACAGATG CGCAAAATAG AATTTTATTC
GTGAATCCGG CATTTGAAAT TGTCACCGGA TACAGCGCGG AAGAAGTAAT CGGTAAGAAT
CCGCGCATTT TGCAATCTGG AATGCATGAT AAACAATTTT ACAAAAAAAT GTGGAATGAT
ATAAAACAAC ATGGAGTATG GAAAGGGGAA ATATGGAATA AGCGAAAAGA TGGGGAATTG
TATCTTGAAT GGTTAACTAT TAGTGTGGTA AAGGATCAAA AGGGAAATAT GACAAATTAT
GTGGCGATGT TTTCTGACAT TACAGAACAT AAACGAAATG TCGAGCAATT AACGAGACTA
GCGCTTTATG ATACATTAAC AAACGTGCCG AATCGGTACT TGCTTGAAAA ACGATTAGAA
AGTATTATTC GAATGTCCAA AAAACATAAT CAGTCATTTG CTTTATTATT TCTAGATTTA
GATCGCTTCA AAAACATTAA TGATACGTTA GGCCACCGTG TGGGAGATAT GTTATTGAAA
GAAACGGCGC AACGTCTGAA AAGAATGTTG CGAAAACAAG ATACGATCGC GAGGTTTGGC
GGTGATGAAT TCGTCATTAT TTTGCCAAAT TTAAAACATA TTCGCGAAGC AGCATATATG
GCGGAAAAAA TTGTGGAATC ATTGAAGAGG CCGTTTTGCT TTAACCATCA AGAAATATAT
ATATCTACTA GCATCGGTAT TAGTGTTTAT CCATACGACG GAACAGATAA AGAAACGTTG
ATACGCATGG CCGATCGCGC GATGTACCAA GCAAAAAAGA ATGGAAGAAA TCAATATGCT
TTGTATCATG CTGGAATGCA TGGTAACGGT AAACAATTGT TTCAGCTTGA AACTGCATTG
AGGAAGGCGC TTGAAAGGGG AGAATTTGAA CTTTACTATC AGCCGCAATT AGATATAAAA
ACGAAACAAA TTCGTGCGGT AGAGGCGTTA ATCCGCTGGA ACCATCCAGA AAAAGGATTT
ATTTCTCCAG GAATGTTTAT TCCGCTTGCC GAAGAATCGG GGCTAATTAC GCCGATTAGT
GATTGGATTA TGATGCAAGC ATGTGAACAT TTGAAACAAT TGCAGTTACG TTTCCCTTAT
GTAAAAATGA GCATAAATAT TTCTCCTATC TATTTTCAAC AAATTGATTT TTTGAAGAAA
TTGCAAAAAA CGATCGAATC GGTAAACGTG AATCCACGTT TGATCGAGCT GGAATTGACG
GAAAGCGCCG TCATGCCTCA CGCTGAACAG TCAGTGGAAA GGCTCACCAA GTTAAAAACG
ATGGGAATGA GCATTGCGAT CGATGATTTT GGAACGGGAT TTTCCTCGTT AAGTTATTTG
CATCGTTTTC CGATCGATAT ACTGAAAATC GATCGAAGTT TTACCAAGCA ATTATCTCGG
TATCAACAAG ACTCGGCAAT TGTCAAGGCT ATTATTATGA TGGCGCACAG CCTTCAGATT
CGAGTGGTGG CTGAAGGCGT GGAAACGAAG AAACAGTATC AAATACTGGA AAAGCAATCT
TGTGATTTTG TACAAGGATA TTATGTATCT AAGCCGCTAT CAATTAGCGA ATTATATGAG
TTTTTAGATA TGTGGAACCA TCTTTAG
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| Protein sequence | MYDHDQQLID IHTFAGIAKN IFEYSNESII ITDAQNRILF VNPAFEIVTG YSAEEVIGKN
PRILQSGMHD KQFYKKMWND IKQHGVWKGE IWNKRKDGEL YLEWLTISVV KDQKGNMTNY
VAMFSDITEH KRNVEQLTRL ALYDTLTNVP NRYLLEKRLE SIIRMSKKHN QSFALLFLDL
DRFKNINDTL GHRVGDMLLK ETAQRLKRML RKQDTIARFG GDEFVIILPN LKHIREAAYM
AEKIVESLKR PFCFNHQEIY ISTSIGISVY PYDGTDKETL IRMADRAMYQ AKKNGRNQYA
LYHAGMHGNG KQLFQLETAL RKALERGEFE LYYQPQLDIK TKQIRAVEAL IRWNHPEKGF
ISPGMFIPLA EESGLITPIS DWIMMQACEH LKQLQLRFPY VKMSINISPI YFQQIDFLKK
LQKTIESVNV NPRLIELELT ESAVMPHAEQ SVERLTKLKT MGMSIAIDDF GTGFSSLSYL
HRFPIDILKI DRSFTKQLSR YQQDSAIVKA IIMMAHSLQI RVVAEGVETK KQYQILEKQS
CDFVQGYYVS KPLSISELYE FLDMWNHL
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