Gene GWCH70_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1905 
Symbol 
ID7978734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp1957797 
End bp1959503 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content37% 
IMG OID644798736 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_002949906 
Protein GI239827282 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00246734 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTATGATC ATGATCAACA ACTAATAGAT ATACATACGT TCGCTGGAAT TGCAAAAAAT 
ATTTTTGAAT ATTCTAACGA AAGCATTATT ATTACAGATG CGCAAAATAG AATTTTATTC
GTGAATCCGG CATTTGAAAT TGTCACCGGA TACAGCGCGG AAGAAGTAAT CGGTAAGAAT
CCGCGCATTT TGCAATCTGG AATGCATGAT AAACAATTTT ACAAAAAAAT GTGGAATGAT
ATAAAACAAC ATGGAGTATG GAAAGGGGAA ATATGGAATA AGCGAAAAGA TGGGGAATTG
TATCTTGAAT GGTTAACTAT TAGTGTGGTA AAGGATCAAA AGGGAAATAT GACAAATTAT
GTGGCGATGT TTTCTGACAT TACAGAACAT AAACGAAATG TCGAGCAATT AACGAGACTA
GCGCTTTATG ATACATTAAC AAACGTGCCG AATCGGTACT TGCTTGAAAA ACGATTAGAA
AGTATTATTC GAATGTCCAA AAAACATAAT CAGTCATTTG CTTTATTATT TCTAGATTTA
GATCGCTTCA AAAACATTAA TGATACGTTA GGCCACCGTG TGGGAGATAT GTTATTGAAA
GAAACGGCGC AACGTCTGAA AAGAATGTTG CGAAAACAAG ATACGATCGC GAGGTTTGGC
GGTGATGAAT TCGTCATTAT TTTGCCAAAT TTAAAACATA TTCGCGAAGC AGCATATATG
GCGGAAAAAA TTGTGGAATC ATTGAAGAGG CCGTTTTGCT TTAACCATCA AGAAATATAT
ATATCTACTA GCATCGGTAT TAGTGTTTAT CCATACGACG GAACAGATAA AGAAACGTTG
ATACGCATGG CCGATCGCGC GATGTACCAA GCAAAAAAGA ATGGAAGAAA TCAATATGCT
TTGTATCATG CTGGAATGCA TGGTAACGGT AAACAATTGT TTCAGCTTGA AACTGCATTG
AGGAAGGCGC TTGAAAGGGG AGAATTTGAA CTTTACTATC AGCCGCAATT AGATATAAAA
ACGAAACAAA TTCGTGCGGT AGAGGCGTTA ATCCGCTGGA ACCATCCAGA AAAAGGATTT
ATTTCTCCAG GAATGTTTAT TCCGCTTGCC GAAGAATCGG GGCTAATTAC GCCGATTAGT
GATTGGATTA TGATGCAAGC ATGTGAACAT TTGAAACAAT TGCAGTTACG TTTCCCTTAT
GTAAAAATGA GCATAAATAT TTCTCCTATC TATTTTCAAC AAATTGATTT TTTGAAGAAA
TTGCAAAAAA CGATCGAATC GGTAAACGTG AATCCACGTT TGATCGAGCT GGAATTGACG
GAAAGCGCCG TCATGCCTCA CGCTGAACAG TCAGTGGAAA GGCTCACCAA GTTAAAAACG
ATGGGAATGA GCATTGCGAT CGATGATTTT GGAACGGGAT TTTCCTCGTT AAGTTATTTG
CATCGTTTTC CGATCGATAT ACTGAAAATC GATCGAAGTT TTACCAAGCA ATTATCTCGG
TATCAACAAG ACTCGGCAAT TGTCAAGGCT ATTATTATGA TGGCGCACAG CCTTCAGATT
CGAGTGGTGG CTGAAGGCGT GGAAACGAAG AAACAGTATC AAATACTGGA AAAGCAATCT
TGTGATTTTG TACAAGGATA TTATGTATCT AAGCCGCTAT CAATTAGCGA ATTATATGAG
TTTTTAGATA TGTGGAACCA TCTTTAG
 
Protein sequence
MYDHDQQLID IHTFAGIAKN IFEYSNESII ITDAQNRILF VNPAFEIVTG YSAEEVIGKN 
PRILQSGMHD KQFYKKMWND IKQHGVWKGE IWNKRKDGEL YLEWLTISVV KDQKGNMTNY
VAMFSDITEH KRNVEQLTRL ALYDTLTNVP NRYLLEKRLE SIIRMSKKHN QSFALLFLDL
DRFKNINDTL GHRVGDMLLK ETAQRLKRML RKQDTIARFG GDEFVIILPN LKHIREAAYM
AEKIVESLKR PFCFNHQEIY ISTSIGISVY PYDGTDKETL IRMADRAMYQ AKKNGRNQYA
LYHAGMHGNG KQLFQLETAL RKALERGEFE LYYQPQLDIK TKQIRAVEAL IRWNHPEKGF
ISPGMFIPLA EESGLITPIS DWIMMQACEH LKQLQLRFPY VKMSINISPI YFQQIDFLKK
LQKTIESVNV NPRLIELELT ESAVMPHAEQ SVERLTKLKT MGMSIAIDDF GTGFSSLSYL
HRFPIDILKI DRSFTKQLSR YQQDSAIVKA IIMMAHSLQI RVVAEGVETK KQYQILEKQS
CDFVQGYYVS KPLSISELYE FLDMWNHL